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CAZyme Information: SPCC63.04.1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Schizosaccharomyces pombe | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Schizosaccharomycetes; ; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe | |||||||||||
| CAZyme ID | SPCC63.04.1-p1 | |||||||||||
| CAZy Family | GT59 | |||||||||||
| CAZyme Description | alpha-1,4-glucan synthase Mok14 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 2.4.1.183:36 | 2.4.1.-:11 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT5 | 257 | 723 | 5.1e-68 | 0.9936440677966102 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 340822 | GT5_Glycogen_synthase_DULL1-like | 7.31e-124 | 257 | 718 | 2 | 472 | Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| 223374 | GlgA | 1.08e-114 | 821 | 1347 | 1 | 487 | Glycogen synthase [Carbohydrate transport and metabolism]. |
| 223374 | GlgA | 2.59e-26 | 257 | 725 | 3 | 482 | Glycogen synthase [Carbohydrate transport and metabolism]. |
| 234809 | glgA | 3.19e-26 | 273 | 724 | 14 | 466 | glycogen synthase GlgA. |
| 340831 | GT4_PimA-like | 1.32e-17 | 375 | 723 | 74 | 366 | phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 1369 | 1 | 1369 | |
| 0.0 | 1 | 1369 | 1 | 1369 | |
| 0.0 | 1 | 1369 | 1 | 1369 | |
| 0.0 | 126 | 1369 | 1007 | 2358 | |
| 0.0 | 126 | 1369 | 1020 | 2371 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.16e-16 | 274 | 726 | 24 | 491 | Crystal Structure of Rice Granule bound Starch Synthase I Catalytic Domain [Oryza sativa Japonica Group],3VUF_A Crystal Structure of Rice Granule bound Starch Synthase I Catalytic Domain in Complex with ADP [Oryza sativa Japonica Group] |
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| 3.98e-15 | 383 | 662 | 129 | 403 | Chain A, Glycogen synthase [Escherichia coli] |
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| 4.13e-15 | 383 | 662 | 129 | 403 | Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12] |
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| 2.22e-14 | 383 | 662 | 129 | 403 | Chain A, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli] |
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| 9.29e-11 | 531 | 721 | 352 | 555 | Granule Bound Starch Synthase I from Cyanophora paradoxa bound to acarbose and ADP [Cyanophora paradoxa],6GNG_B Granule Bound Starch Synthase I from Cyanophora paradoxa bound to acarbose and ADP [Cyanophora paradoxa] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 0.0 | 126 | 1369 | 1007 | 2358 | Cell wall alpha-1,3-glucan synthase mok13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mok13 PE=3 SV=2 |
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| 0.0 | 126 | 1369 | 1017 | 2410 | Cell wall alpha-1,3-glucan synthase ags1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ags1 PE=1 SV=3 |
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| 0.0 | 13 | 1369 | 905 | 2397 | Cell wall alpha-1,3-glucan synthase mok11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mok11 PE=3 SV=2 |
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| 0.0 | 1 | 1369 | 1 | 1369 | Cell wall alpha-1,3-glucan synthase mok14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mok14 PE=1 SV=1 |
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| 1.92e-267 | 146 | 1348 | 1059 | 2332 | Cell wall alpha-1,3-glucan synthase mok12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mok12 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.117626 | 0.882346 | CS pos: 22-23. Pr: 0.8338 |
TMHMM Annotations download full data without filtering help
| Start | End |
|---|---|
| 176 | 198 |
| 936 | 958 |
| 973 | 995 |
| 1000 | 1022 |
| 1032 | 1054 |
| 1066 | 1088 |
| 1108 | 1130 |
| 1156 | 1178 |
| 1193 | 1212 |
| 1225 | 1247 |
| 1262 | 1284 |
| 1291 | 1313 |
| 1339 | 1361 |