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CAZyme Information: SPBR_03930-t41_1-p1

You are here: Home > Sequence: SPBR_03930-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sporothrix brasiliensis
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Sporothrix; Sporothrix brasiliensis
CAZyme ID SPBR_03930-t41_1-p1
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
597 AWTV01000001|CGC1 63655.03 6.5002
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Sbrasiliensis5110 9231 1398154 140 9091
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:13

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 31 583 3.5e-238 0.9890510948905109

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 1.69e-50 37 585 1 538
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 1.15e-25 40 590 2 544
choline dehydrogenase; Validated
398739 GMC_oxred_C 2.32e-24 442 576 3 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 1.03e-15 124 351 23 216
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 5.41e-09 30 321 42 307
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.79e-307 35 584 27 568
1.07e-277 42 583 295 835
1.51e-266 86 583 1 490
3.00e-266 33 586 264 814
2.22e-264 35 584 28 517

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.33e-246 38 584 2 546
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
6.93e-243 38 584 224 768
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
1.54e-241 30 584 216 767
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
1.14e-127 44 583 3 537
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
1.33e-127 44 583 8 542
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.07e-124 30 583 225 769
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
2.08e-19 45 589 4 534
Oxygen-dependent choline dehydrogenase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=betA PE=3 SV=1
3.67e-19 45 589 4 534
Oxygen-dependent choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) OX=311403 GN=betA PE=3 SV=1
1.14e-18 45 589 4 534
Oxygen-dependent choline dehydrogenase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=betA PE=3 SV=2
4.72e-18 45 589 4 534
Oxygen-dependent choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) OX=491916 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.770272 0.229745

TMHMM  Annotations      help

There is no transmembrane helices in SPBR_03930-t41_1-p1.