logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SPBR_00576-t41_1-p1

You are here: Home > Sequence: SPBR_00576-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sporothrix brasiliensis
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Sporothrix; Sporothrix brasiliensis
CAZyme ID SPBR_00576-t41_1-p1
CAZy Family AA3
CAZyme Description cellulose hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
487 AWTV01000008|CGC15 50788.80 7.3157
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Sbrasiliensis5110 9231 1398154 140 9091
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:3 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 41 480 1.4e-170 0.9909706546275395

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 3.70e-20 42 480 36 427
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
396577 Glyco_hydro_59 2.85e-09 77 383 24 293
Glycosyl hydrolase family 59.
405300 Glyco_hydr_30_2 9.44e-08 41 243 3 219
O-Glycosyl hydrolase family 30.
307945 Glyco_hydro_30 2.88e-04 153 233 96 184
Glycosyl hydrolase family 30 TIM-barrel domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.76e-202 40 481 19 466
6.45e-186 1 487 1 480
9.63e-177 1 487 1 465
1.53e-165 1 487 1 454
4.39e-145 40 484 27 475

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.33e-146 40 484 3 451
Chain A, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
1.16e-144 40 484 10 458
Chain AAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
3.72e-99 41 481 24 453
Chain A, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
2.87e-97 42 480 24 470
Chain A, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
2.13e-96 42 480 95 541
Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.80e-146 40 484 27 475
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
3.61e-14 26 420 37 443
Endo-1,6-beta-D-glucanase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=neg-1 PE=1 SV=2
7.53e-09 41 261 92 320
Putative glucosylceramidase 3 OS=Caenorhabditis elegans OX=6239 GN=gba-3 PE=3 SV=1
6.16e-06 139 419 181 483
Putative glucosylceramidase 4 OS=Caenorhabditis elegans OX=6239 GN=gba-4 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000312 0.999644 CS pos: 18-19. Pr: 0.9787

TMHMM  Annotations      help

There is no transmembrane helices in SPBR_00576-t41_1-p1.