CAZyme Information: SPBR_00365-t41_1-p1

Basic Information

• Species: Sporothrix brasiliensis
• Lineage: Ascomycota; Sordariomycetes; ; Ophiostomataceae; Sporothrix; Sporothrix brasiliensis
• CAZyme ID: SPBR_00365-t41_1-p1
• CAZy Family: AA11
• CAZyme Description: glucoamylase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
651		68789.14	4.6673

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Sbrasiliensis5110	9231	1398154	140	9091

• Gene Location: location=AWTV01000008:1640573-1642528(-)

Full Sequence      

MPSLRSWAVAALTLARTVLGAPPRVDPRADVGTWLDSEAAVAVERILSNIGSSGQYAASA
KSGIVIASPSTSNPDCMSPPPPLVDHVLVPLLMPPPFSTDYYTWSRDAALVMKTLTELFR
NGDASVQSAITHYIDSQATLQTVSNPSGQLSDGSGLGEPKFNVDETAFTGSWGRPQRDGP
ALRATALVGFGNWLLDNGYASYAAANVWPVVRNDLAYVAQYWNQTGYDLWEEVSGSSFFT
VSAQHRALVEGSAFATRVGSSCTSCTAIAPQILCYMQSFWTGSYMNANVGGGRTGKDANT
VLASIHAFDPTAACDDATFQPCSSRALANHKVYTDSFRSVYALNSGKAEGVAVAVGRYPE
DSYYNGNPWYLTTLAAAEQLYDALYTWNRIGSLTIDSTSLAFFKDLYSSAAVGTYGATST
AYASIVAAAKTYADGYVSIVETYAMANGSLSEQYDKSSGSPLSARDLTWSYAALLTAKMR
RDSVVPPPWGETSASGVPSVCSATSVSGSYSTAAVGSWPSSLTSGTVTSSGTGGATSTTS
TTACTTPTAVAVTFNEIATTSYGESVFLTGSLSALGNWDTSSAIALSAADYTSSDHKWFV
TLNLPAGTTFQYKYIRKEADGSVVWESDPNRSYTVPKGCNTATATENDTWR

Enzyme Prediction     

EC	3.2.1.3:94	1.14.99.55:4

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH15	54	477	1.1e-72	0.961218836565097
CBM20	550	641	1.1e-30	0.9777777777777777

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
395586	Glyco_hydro_15	9.36e-132	40	477	1	415	Glycosyl hydrolases family 15. In higher organisms this family is represented by phosphorylase kinase subunits.
99886	CBM20_glucoamylase	2.57e-48	550	650	7	106	Glucoamylase (glucan1,4-alpha-glucosidase), C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Glucoamylases are inverting, exo-acting starch hydrolases that hydrolyze starch and related polysaccharides by releasing the nonreducing end glucose. They are mainly active on alpha-1,4-glycosidic bonds but also have some activity towards 1,6-glycosidic bonds occurring in natural oligosaccharides. The ability of glucoamylases to cleave 1-6-glycosidic binds is called "debranching activity" and is of importance in industrial applications, where complete degradation of starch to glucose is needed. Most glucoamylases are multidomain proteins containing an N-terminal catalytic domain, a C-terminal CBM20 domain, and a highly O-glycosylated linker region that connects the two. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognition of appropriate regions of starch.
395557	CBM_20	1.33e-40	550	645	1	95	Starch binding domain.
99883	CBM20_alpha_amylase	3.27e-36	550	651	1	95	Alpha-amylase, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. This domain is found in several bacterial and fungal alpha-amylases including the maltopentaose-forming amylases (G5-amylases). Most alpha-amylases have, in addition to the C-terminal CBM20 domain, an N-terminal catalytic domain belonging to glycosyl hydrolase family 13, which hydrolyzes internal alpha-1,4-glucosidic bonds in starch and related saccharides, yielding maltotriose and maltose. Two types of soluble substrates are used by alpha-amylases including long substrates (e.g. amylose) and short substrates (e.g. maltodextrins or maltooligosaccharides). The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognition of appropriate regions of starch.
119437	CBM20	6.23e-28	552	650	2	96	The family 20 carbohydrate-binding module (CBM20), also known as the starch-binding domain, is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognition of appropriate regions of starch.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BAN67899.1|CBM20|GH15|3.2.1.3	5.45e-293	21	651	22	638
AOS89805.1|CBM20|GH15|3.2.1.3	5.66e-292	7	651	6	635
AVQ10352.1|CBM20|GH15	5.66e-292	7	651	6	635
EPS34453.1|CBM20|GH15	3.25e-291	7	651	6	635
EDP53734.1|CBM20|GH15	2.29e-290	1	651	1	631

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6FRV_A	6.12e-261	29	651	1	616	Structure of the catalytic domain of Aspergillus niger Glucoamylase [Aspergillus niger]
1GAI_A	2.93e-220	29	525	1	472	GLUCOAMYLASE-471 COMPLEXED WITH D-GLUCO-DIHYDROACARBOSE [Aspergillus awamori]
1AGM_A	5.48e-220	29	520	1	467	Refined structure for the complex of acarbose with glucoamylase from Aspergillus awamori var. x100 to 2.4 angstroms resolution [Aspergillus awamori],1DOG_A REFINED STRUCTURE FOR THE COMPLEX OF 1-DEOXYNOJIRIMYCIN WITH GLUCOAMYLASE FROM (ASPERGILLUS AWAMORI) VAR. X100 TO 2.4 ANGSTROMS RESOLUTION [Aspergillus awamori],1GLM_A REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100 [Aspergillus awamori],3GLY_A REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100 [Aspergillus awamori]
1GAH_A	5.68e-220	29	520	1	467	GLUCOAMYLASE-471 COMPLEXED WITH ACARBOSE [Aspergillus awamori]
3EQA_A	1.03e-217	29	520	1	468	Catalytic domain of glucoamylase from aspergillus niger complexed with tris and glycerol [Aspergillus niger]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P22832|AMYG_ASPUS	2.14e-266	25	651	21	639	Glucoamylase OS=Aspergillus usamii OX=186680 GN=glaA PE=3 SV=1
sp|P23176|AMYG_ASPKA	9.36e-263	25	651	21	639	Glucoamylase I OS=Aspergillus kawachii OX=1069201 GN=gaI PE=1 SV=1
sp|P69327|AMYG_ASPAW	6.42e-261	25	651	21	640	Glucoamylase OS=Aspergillus awamori OX=105351 GN=GLAA PE=1 SV=1
sp|P69328|AMYG_ASPNG	6.42e-261	25	651	21	640	Glucoamylase OS=Aspergillus niger OX=5061 GN=GLAA PE=1 SV=1
sp|P36914|AMYG_ASPOR	4.83e-256	6	651	5	612	Glucoamylase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=glaA PE=2 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000313	0.999654	CS pos: 20-21. Pr: 0.9821

TMHMM  Annotations     

There is no transmembrane helices in SPBR_00365-t41_1-p1.