CAZyme Information: SPBC1921.06c.1-p1

Basic Information

• Species: Schizosaccharomyces pombe
• Lineage: Ascomycota; Schizosaccharomycetes; ; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe
• CAZyme ID: SPBC1921.06c.1-p1
• CAZy Family: GT31
• CAZyme Description: Golgi galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
378		43834.13	5.4864

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Spombe972h	6995	284812	1857	5138

• Gene Location: location=Spom972h_chrII:2417166-2418302(-)

Full Sequence      

MFSNSKKKIFLYVLIAGVATFSFAFLVLNRLQAEEHSLAYVENLFLDPFIKQNESLAHAN
DRPFKLYLGIFSQAKNVDRRNFLRTDYNEYIKEFAVNDTVDVRFILGLPENEQELATIRE
EQRTYGDLAVLPIPENVDAGKSIVYFQTFLEGYQPFPLFSELADNLIMPSTQFHGSFIYN
QSIKTYELPGMKEFQDLGEPKHDYDFIVKADDDSFLNLPRLFEMLKEHVGKSRFYFGRDC
TRRELPTAVRDFPYMCGFFYIVSPDMAYEVAKRRNIIIPFEDAQTGYSIYLSGNVKNAEF
SKCTLYDLILPNEGFNYRQSYLRIDAIAVHKLKSIPLLSTVSNWFKKMYEHRANCSALIE
TERLSCLQATIPLPSLDV

Enzyme Prediction     

No EC number prediction in SPBC1921.06c.1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT31	79	288	2e-20	0.9322916666666666

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
215596	PLN03133	8.74e-07	61	132	382	451	beta-1,3-galactosyltransferase; Provisional
250845	Galactosyl_T	4.18e-05	103	282	24	177	Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2.
178735	PLN03193	0.002	164	237	195	270	beta-1,3-galactosyltransferase; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
NP_595999.1|GT31|2.4.1.-	1.40e-281	1	378	1	378
CAB58972.1|GT31|2.4.1.-	1.40e-281	1	378	1	378
BAD19302.1|GT31	1.11e-15	64	345	79	313
BAS81262.1|GT31	1.11e-15	64	345	79	313
BAF10243.1|GT31	1.11e-15	64	345	79	313

PDB Hits     

SPBC1921.06c.1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q9USX0|PVG3_SCHPO	2.49e-282	1	378	1	378	Beta-1,3-galactosyltransferase pvg3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pvg3 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000002	0.000018

TMHMM  Annotations     

Start	End
9	28