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CAZyme Information: SPBC1289.13c.1-p1

You are here: Home > Sequence: SPBC1289.13c.1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Schizosaccharomyces pombe
Lineage Ascomycota; Schizosaccharomycetes; ; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe
CAZyme ID SPBC1289.13c.1-p1
CAZy Family GT2
CAZyme Description alpha-1,2-galactosyltransferase Gmh6
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
375 Spom972h_chrII|CGC18 43117.68 5.2273
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Spombe972h 6995 284812 1857 5138
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-:7

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT34 102 341 2.5e-75 0.9878048780487805

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
368535 Glyco_transf_34 5.19e-113 100 339 1 238
galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologs where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.
215616 PLN03181 9.06e-13 95 295 116 309
glycosyltransferase; Provisional
215617 PLN03182 1.05e-12 93 268 121 261
xyloglucan 6-xylosyltransferase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.19e-276 1 375 1 375
1.19e-276 1 375 1 375
1.19e-276 1 375 1 375
5.28e-145 1 373 1 373
5.28e-145 1 373 1 373

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.71e-11 99 333 31 266
Chain A, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSU_B Chain B, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSV_A Chain A, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSV_B Chain B, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSW_A Chain A, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSW_B Chain B, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.11e-277 1 375 1 375
Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1289.13c PE=3 SV=1
9.38e-146 1 373 1 373
Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gma12 PE=1 SV=1
5.05e-48 99 350 82 329
Probable alpha-1,2-galactosyltransferase gmh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh1 PE=3 SV=1
1.14e-46 99 350 84 331
Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh3 PE=3 SV=1
3.53e-44 98 350 95 345
Probable alpha-1,2-galactosyltransferase gmh2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh2 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.948810 0.051200

TMHMM  Annotations      download full data without filtering help

Start End
7 29