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CAZyme Information: SPAC23A1.04c.1-p1

You are here: Home > Sequence: SPAC23A1.04c.1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Schizosaccharomyces pombe
Lineage Ascomycota; Schizosaccharomycetes; ; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe
CAZyme ID SPAC23A1.04c.1-p1
CAZy Family GH16
CAZyme Description alpha mannosidase Mnl1 (predicted)
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
787 Spom972h_chrI|CGC16 89318.44 5.1193
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Spombe972h 6995 284812 1857 5138
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SPAC23A1.04c.1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH47 43 477 1.7e-134 0.9955156950672646

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396217 Glyco_hydro_47 1.65e-140 42 477 1 453
Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2).
240427 PTZ00470 7.09e-70 36 480 73 521
glycoside hydrolase family 47 protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 787 1 787
0.0 1 787 1 787
1.30e-162 42 559 1 527
2.22e-159 31 616 31 638
1.17e-156 31 720 48 784

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.90e-52 42 477 12 451
Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase and Man9GlcNAc2-PA complex [Homo sapiens]
6.73e-52 42 477 17 456
Crystal Structure Of Human Class I Alpha1,2-Mannosidase [Homo sapiens]
7.03e-52 42 477 17 456
Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin [Homo sapiens],1FO3_A Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With Kifunensine [Homo sapiens]
3.06e-51 42 477 12 451
Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase T688A mutant and Thio-disaccharide substrate analog complex [Homo sapiens],5KK7_B Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase T688A mutant and Thio-disaccharide substrate analog complex [Homo sapiens]
3.38e-51 42 477 95 534
Crystal Structure Of Human Class I alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 1 787 1 787
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mnl1 PE=3 SV=2
6.28e-135 20 482 115 591
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Homo sapiens OX=9606 GN=EDEM1 PE=1 SV=1
2.99e-134 20 482 110 586
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Mus musculus OX=10090 GN=Edem1 PE=1 SV=1
5.56e-117 34 493 39 489
Alpha-mannosidase I MNS4 OS=Arabidopsis thaliana OX=3702 GN=MNS4 PE=1 SV=1
4.50e-104 29 561 29 597
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNL1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000207 0.999737 CS pos: 25-26. Pr: 0.9683

TMHMM  Annotations      help

There is no transmembrane helices in SPAC23A1.04c.1-p1.