CAZyme Information: SPAC22E12.06c.1-p1

Basic Information

• Species: Schizosaccharomyces pombe
• Lineage: Ascomycota; Schizosaccharomycetes; ; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe
• CAZyme ID: SPAC22E12.06c.1-p1
• CAZy Family: GH15
• CAZyme Description: alpha-1,2-galactosyltransferase Gmh3

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
332	Spom972h_chrI|CGC30	38053.51	5.1811

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Spombe972h	6995	284812	1857	5138

• Gene Location: location=Spom972h_chrI:5029000-5029998(-)

Full Sequence      

MAVLQWKLSRVIFVLLIIGISSFLIYFQFGNSFSASPALERLQDVFSKPSVQEYDYLVPL
DEDMQGLSTTYHQATINEDDPQEPKSHEIVILLASDGRSSGNMAPETFNQCIENRINYAK
HHNYGFEYVNVSQMNIPPVWAKMPAIIQTMNKHPHAKWIWWLDQDALILNTELSIQEHIL
SPDVLVEKLMKNEPMISPFSADLERLTPSSYTVDSARSLGLLISQDLNGLNAGSFFVRRS
PMMALFLDLWGDKSFRENKVADHEQALLGYFVRYHPEIAAIIGILPQTLINSYPVGQPEM
GWKEGHLVIHFAGCWVENRCQVLWDEYRERVH

Enzyme Prediction     

EC	2.4.1.-:2

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT34	87	321	3e-71	0.983739837398374

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
368535	Glyco_transf_34	2.76e-109	85	320	1	238	galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologs where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.
215616	PLN03181	1.22e-10	111	277	153	310	glycosyltransferase; Provisional
215617	PLN03182	2.29e-07	112	167	153	209	xyloglucan 6-xylosyltransferase; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CBF58105.1|GT34|2.4.1.-	2.67e-249	1	332	1	332
CAA93893.1|GT34|2.4.1.-	2.67e-249	1	332	1	332
CBF58102.1|GT34	5.56e-105	15	331	15	328
NP_592824.1|GT34	5.56e-105	15	331	15	328
CAA89961.1|GT34	5.56e-105	15	331	15	328

PDB Hits     

SPAC22E12.06c.1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q10359|GMH3_SCHPO	4.75e-250	1	332	1	332	Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh3 PE=3 SV=1
sp|Q09679|GMH1_SCHPO	9.87e-106	15	331	15	328	Probable alpha-1,2-galactosyltransferase gmh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh1 PE=3 SV=1
sp|Q09681|GMH2_SCHPO	4.26e-93	42	327	54	341	Probable alpha-1,2-galactosyltransferase gmh2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh2 PE=3 SV=1
sp|O94622|YBKD_SCHPO	1.99e-46	84	327	99	346	Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1289.13c PE=3 SV=1
sp|Q09174|GMA12_SCHPO	2.48e-42	84	329	99	348	Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gma12 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000007	0.000031

TMHMM  Annotations     

Start	End
12	29