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CAZyme Information: SOCG_03020-t26_1-p1

You are here: Home > Sequence: SOCG_03020-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Schizosaccharomyces octosporus
Lineage Ascomycota; Schizosaccharomycetes; ; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces octosporus
CAZyme ID SOCG_03020-t26_1-p1
CAZy Family GT20
CAZyme Description alpha mannosidase-like protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
795 90473.91 5.2468
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SoctosporusyFS286 5355 483514 361 4994
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.113:6

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH47 41 475 1.2e-136 0.9955156950672646

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396217 Glyco_hydro_47 7.77e-141 40 475 1 453
Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2).
240427 PTZ00470 4.54e-75 15 475 53 518
glycoside hydrolase family 47 protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.43e-305 25 786 27 786
3.43e-305 25 786 27 786
1.82e-160 9 614 4 638
1.16e-159 40 545 1 514
4.44e-159 34 738 53 802

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.53e-48 39 477 16 458
Crystal Structure Of Human Class I Alpha1,2-Mannosidase [Homo sapiens]
3.68e-48 39 477 16 458
Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin [Homo sapiens],1FO3_A Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With Kifunensine [Homo sapiens]
4.26e-48 39 475 11 451
Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase and Man9GlcNAc2-PA complex [Homo sapiens]
1.58e-47 39 477 11 453
Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase T688A mutant and Thio-disaccharide substrate analog complex [Homo sapiens],5KK7_B Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase T688A mutant and Thio-disaccharide substrate analog complex [Homo sapiens]
1.61e-47 39 477 94 536
Crystal Structure Of Human Class I alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.09e-306 25 786 27 786
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mnl1 PE=3 SV=2
1.06e-129 33 476 125 582
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Mus musculus OX=10090 GN=Edem1 PE=1 SV=1
4.78e-129 33 476 130 587
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Homo sapiens OX=9606 GN=EDEM1 PE=1 SV=1
1.16e-118 16 572 23 558
Alpha-mannosidase I MNS4 OS=Arabidopsis thaliana OX=3702 GN=MNS4 PE=1 SV=1
2.05e-111 20 707 22 716
ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Xenopus laevis OX=8355 GN=edem3 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000293 0.999691 CS pos: 22-23. Pr: 0.9800

TMHMM  Annotations      help

There is no transmembrane helices in SOCG_03020-t26_1-p1.