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CAZyme Information: SOCG_01856-t26_1-p1

You are here: Home > Sequence: SOCG_01856-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Schizosaccharomyces octosporus
Lineage Ascomycota; Schizosaccharomycetes; ; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces octosporus
CAZyme ID SOCG_01856-t26_1-p1
CAZy Family GH72|CBM43
CAZyme Description alpha-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
430 KE503208|CGC2 48737.93 4.7987
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SoctosporusyFS286 5355 483514 361 4994
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.22:15

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH27 122 391 1.6e-72 0.9868995633187773

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
269893 GH27 6.96e-136 27 317 1 271
glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
166449 PLN02808 2.55e-113 19 412 24 383
alpha-galactosidase
177874 PLN02229 4.67e-111 19 416 55 421
alpha-galactosidase
178295 PLN02692 3.35e-106 19 413 48 409
alpha-galactosidase
374582 Melibiase_2 4.40e-82 26 317 1 284
Alpha galactosidase A.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.63e-199 21 414 27 420
4.63e-199 21 414 27 420
3.68e-184 17 415 19 416
2.05e-154 9 419 11 417
5.74e-153 16 422 14 426

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.40e-152 20 419 2 397
Crystal structure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea]
4.26e-134 21 420 24 428
Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRL_A Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae]
6.87e-133 21 420 24 428
Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_B Chain B, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_C Chain C, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_D Chain D, Alpha-galactosidase 1 [Saccharomyces cerevisiae]
5.66e-94 20 412 2 359
Chain A, alpha-galactosidase [Oryza sativa]
1.87e-89 19 412 1 360
Nicotiana benthamiana alpha-galactosidase [Nicotiana benthamiana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.23e-200 21 414 27 420
Alpha-galactosidase mel1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mel1 PE=3 SV=1
9.03e-146 8 406 15 417
Alpha-galactosidase OS=Lachancea cidri OX=29831 GN=MEL PE=3 SV=1
1.10e-136 4 421 2 429
Alpha-galactosidase OS=Zygotorulaspora mrakii OX=42260 GN=MEL PE=3 SV=1
1.48e-134 12 387 10 397
Alpha-galactosidase OS=Saccharomyces mikatae OX=114525 GN=MEL PE=3 SV=1
1.48e-134 21 420 24 428
Alpha-galactosidase 2 OS=Saccharomyces cerevisiae OX=4932 GN=MEL2 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000197 0.999781 CS pos: 18-19. Pr: 0.9527

TMHMM  Annotations      help

There is no transmembrane helices in SOCG_01856-t26_1-p1.