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CAZyme Information: SOCG_01121-t26_1-p1

You are here: Home > Sequence: SOCG_01121-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Schizosaccharomyces octosporus
Lineage Ascomycota; Schizosaccharomycetes; ; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces octosporus
CAZyme ID SOCG_01121-t26_1-p1
CAZy Family GH38
CAZyme Description alpha-1,2-galactosyltransferase Gmh1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
338 KE503207|CGC19 38617.41 5.0572
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SoctosporusyFS286 5355 483514 361 4994
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT34 94 327 1.9e-64 0.983739837398374

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
368535 Glyco_transf_34 1.71e-85 92 326 1 238
galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologs where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.
215616 PLN03181 2.81e-08 3 254 25 264
glycosyltransferase; Provisional
215617 PLN03182 1.61e-06 120 320 155 359
xyloglucan 6-xylosyltransferase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.98e-114 64 338 55 329
1.98e-114 64 338 55 329
1.98e-114 64 338 55 329
1.59e-88 56 337 55 331
1.59e-88 56 337 55 331

PDB Hits      help

SOCG_01121-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.52e-115 64 338 55 329
Probable alpha-1,2-galactosyltransferase gmh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh1 PE=3 SV=1
2.83e-89 56 337 55 331
Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh3 PE=3 SV=1
9.31e-83 20 333 22 341
Probable alpha-1,2-galactosyltransferase gmh2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh2 PE=3 SV=1
2.35e-51 92 333 100 346
Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1289.13c PE=3 SV=1
1.98e-43 95 337 103 350
Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gma12 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000004 0.000009

TMHMM  Annotations      download full data without filtering help

Start End
12 31