You are browsing environment: FUNGIDB
CAZyme Information: SMR63882.1
You are here: Home > Sequence: SMR63882.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Zymoseptoria tritici | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Dothideomycetes; ; Mycosphaerellaceae; Zymoseptoria; Zymoseptoria tritici | |||||||||||
| CAZyme ID | SMR63882.1 | |||||||||||
| CAZy Family | GT32 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 151 | 409 | 1.1e-51 | 0.7661538461538462 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 3.55e-22 | 158 | 410 | 61 | 315 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 8.60e-19 | 161 | 400 | 148 | 399 | Probable polygalacturonase |
| 177865 | PLN02218 | 4.88e-18 | 41 | 365 | 69 | 381 | polygalacturonase ADPG |
| 227721 | Pgu1 | 7.32e-17 | 41 | 449 | 84 | 530 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 178580 | PLN03003 | 1.21e-16 | 154 | 365 | 111 | 330 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 491 | 1 | 491 | |
| 0.0 | 1 | 491 | 1 | 491 | |
| 0.0 | 1 | 491 | 1 | 491 | |
| 0.0 | 1 | 491 | 1 | 491 | |
| 3.16e-211 | 21 | 491 | 17 | 488 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.03e-90 | 22 | 470 | 1 | 403 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
|
| 5.54e-08 | 49 | 389 | 20 | 366 | Chain A, POLYGALACTURONASE [Pectobacterium carotovorum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.06e-90 | 21 | 470 | 22 | 429 | Probable rhamnogalacturonase E OS=Aspergillus niger OX=5061 GN=rhgE PE=3 SV=1 |
|
| 3.88e-90 | 18 | 470 | 14 | 421 | Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2 |
|
| 4.55e-90 | 18 | 470 | 15 | 421 | Rhamnogalacturonase A OS=Aspergillus aculeatus OX=5053 GN=rhgA PE=1 SV=1 |
|
| 3.87e-89 | 21 | 470 | 21 | 426 | Probable rhamnogalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rhgB PE=3 SV=1 |
|
| 5.95e-89 | 18 | 475 | 18 | 429 | Probable rhamnogalacturonase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000190 | 0.999778 | CS pos: 21-22. Pr: 0.9798 |