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CAZyme Information: SMR54113.1

You are here: Home > Sequence: SMR54113.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Zymoseptoria tritici
Lineage Ascomycota; Dothideomycetes; ; Mycosphaerellaceae; Zymoseptoria; Zymoseptoria tritici
CAZyme ID SMR54113.1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
240 26893.07 6.0253
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_ZtriticiST99CH3D1 11991 1276537 0 11991
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SMR54113.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 5 240 1.9e-45 0.39436619718309857

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
398739 GMC_oxred_C 4.37e-34 118 240 2 124
GMC oxidoreductase. This domain found associated with pfam00732.
225186 BetA 6.16e-23 37 240 333 510
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 6.69e-23 119 240 393 508
choline dehydrogenase; Validated

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.36e-189 1 240 1 240
1.36e-189 1 240 1 240
1.36e-189 1 240 1 240
1.36e-189 1 240 1 240
2.17e-135 2 240 309 547

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.29e-21 47 240 357 546
Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU3_B Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU3_C Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40]
1.29e-21 47 240 357 546
Effect of mutation (R554A) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU2_B Effect of mutation (R554A) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU2_C Effect of mutation (R554A) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40]
1.29e-21 47 240 357 546
Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40],3Q9T_B Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40],3Q9T_C Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40]
4.25e-14 118 240 417 537
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
4.25e-14 118 240 417 537
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.13e-19 107 240 446 581
Glucose dehydrogenase [FAD, quinone] OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=Gld PE=3 SV=4
2.08e-18 81 240 352 504
L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans OX=442 PE=3 SV=1
7.63e-18 107 239 464 591
GMC oxidoreductase family protein Mala s 12.0101 OS=Malassezia sympodialis OX=76777 PE=1 SV=2
7.63e-18 107 239 464 591
GMC oxidoreductase family protein Mala s 12 OS=Malassezia sympodialis (strain ATCC 42132) OX=1230383 GN=MSY001_2108 PE=1 SV=1
3.33e-17 106 240 378 504
Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans OX=301 GN=alkJ PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999744 0.000271

TMHMM  Annotations      help

There is no transmembrane helices in SMR54113.1.