logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SMR53321.1

You are here: Home > Sequence: SMR53321.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Zymoseptoria tritici
Lineage Ascomycota; Dothideomycetes; ; Mycosphaerellaceae; Zymoseptoria; Zymoseptoria tritici
CAZyme ID SMR53321.1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1210 LT854277|CGC14 133227.70 6.4771
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_ZtriticiST99CH3D1 11991 1276537 0 11991
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.101:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH76 785 1149 9.7e-105 0.9357541899441341

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397638 Glyco_hydro_76 0.0 787 1139 1 348
Glycosyl hydrolase family 76. Family of alpha-1,6-mannanases.
223348 Dcm 3.21e-41 447 729 21 327
Site-specific DNA-cytosine methylase [Replication, recombination and repair].
238192 Cyt_C5_DNA_methylase 1.40e-30 447 723 18 274
Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.
395093 DNA_methylase 5.84e-27 447 723 18 323
C-5 cytosine-specific DNA methylase.
273211 dcm 3.41e-22 448 722 17 315
DNA-methyltransferase (dcm). All proteins in this family for which functions are known are DNA-cytosine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 1210 1 1210
0.0 1 1210 1 1229
0.0 1 1210 1 1229
0.0 777 1210 19 452
1.64e-215 777 1210 18 452

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.05e-119 780 1187 28 443
Chain A, Mannan endo-1,6-alpha-mannosidase [Thermochaetoides thermophila DSM 1495],6RY1_A Chain A, Mannan endo-1,6-alpha-mannosidase [Thermochaetoides thermophila DSM 1495],6RY2_A Chain A, Mannan endo-1,6-alpha-mannosidase [Thermochaetoides thermophila DSM 1495],6RY5_A Chain A, Mannan endo-1,6-alpha-mannosidase [Thermochaetoides thermophila DSM 1495],6RY6_A Chain A, Mannan endo-1,6-alpha-mannosidase [Thermochaetoides thermophila DSM 1495],6RY7_A Chain A, Mannan endo-1,6-alpha-mannosidase [Thermochaetoides thermophila DSM 1495]
1.10e-13 414 615 395 609
The crystal structure of mouse DNMT1 (731-1602) mutant - R1279D [Mus musculus]
7.38e-13 414 615 395 609
The crystal structure of mouse DNMT1 (731-1602) mutant - N1248A [Mus musculus]
9.70e-13 414 615 396 610
Crystal structure of mouse DNMT1(731-1602) in the free state [Mus musculus],4DA4_A Structure of mouse DNMT1 (731-1602) bound to hemimethylated CpG DNA [Mus musculus],4DA4_B Structure of mouse DNMT1 (731-1602) bound to hemimethylated CpG DNA [Mus musculus],6W8V_A Crystal structure of mouse DNMT1 in complex with ACG DNA [Mus musculus],6W8V_B Crystal structure of mouse DNMT1 in complex with ACG DNA [Mus musculus],6W8W_A Crystal structure of mouse DNMT1 in complex with CCG DNA [Mus musculus],6W8W_B Crystal structure of mouse DNMT1 in complex with CCG DNA [Mus musculus]
9.71e-13 423 615 406 610
Chain A, DNA (cytosine-5)-methyltransferase 1 [Homo sapiens],6X9J_A Chain A, DNA (cytosine-5)-methyltransferase 1 [Homo sapiens],6X9K_A Chain A, DNA (cytosine-5)-methyltransferase 1 [Homo sapiens],7SFC_A Chain A, DNA (cytosine-5)-methyltransferase 1 [Homo sapiens],7SFD_A Chain A, DNA (cytosine-5)-methyltransferase 1 [Homo sapiens],7SFE_A Chain A, DNA (cytosine-5)-methyltransferase 1 [Homo sapiens],7SFF_A Chain A, DNA (cytosine-5)-methyltransferase 1 [Homo sapiens],7SFG_A Chain A, DNA (cytosine-5)-methyltransferase 1 [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.31e-127 777 1209 21 448
Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DCW1 PE=1 SV=1
2.12e-125 778 1209 22 450
Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DCW1 PE=3 SV=2
3.77e-123 778 1209 19 445
Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=DCW1 PE=3 SV=1
9.01e-118 777 1208 26 456
Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DFG5 PE=1 SV=1
5.70e-115 772 1209 13 451
Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DCW1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000072 0.000000

TMHMM  Annotations      download full data without filtering help

Start End
1187 1209