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CAZyme Information: SMR50302.1

You are here: Home > Sequence: SMR50302.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Zymoseptoria tritici
Lineage Ascomycota; Dothideomycetes; ; Mycosphaerellaceae; Zymoseptoria; Zymoseptoria tritici
CAZyme ID SMR50302.1
CAZy Family GH17
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
331 34193.64 7.3400
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_ZtriticiST99CH3D1 11991 1276537 0 11991
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.55:24 3.2.1.37:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH54 24 330 3.5e-140 0.990506329113924

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
401229 ArabFuran-catal 0.0 24 330 1 315
Alpha-L-arabinofuranosidase B, catalytic. Members of this family, which are present in fungal alpha-L-arabinofuranosidase B, adopt a beta-sandwich fold similar to that of Concanavalin A-like lectins/glucanase. The beta-sandwich fold consists of two anti-parallel beta-sheets with seven and and six strands, respectively. In addition, there are four helices outside of the beta-strands. The beta-sandwich strands are closely packed and curved with a jelly roll topology, creating a small catalytic pocket. The domain catalyzes the hydrolysis of alpha-1,2-, alpha-1,3- and alpha-1,5-L-arabinofuranosidic bonds in L-arabinose-containing hemicelluloses such as arabinoxylan and L-arabinan.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.03e-248 1 331 1 331
2.03e-248 1 331 1 331
2.03e-248 1 331 1 331
8.28e-248 1 331 1 331
1.10e-162 9 331 13 343

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.11e-141 23 329 2 316
Crystal structure of arabinofuranosidase [Aspergillus luchuensis],1WD4_A Crystal structure of arabinofuranosidase complexed with arabinose [Aspergillus luchuensis],6SXS_AAA Chain AAA, Alpha-L-arabinofuranosidase B [Aspergillus luchuensis]
1.14e-141 23 329 3 317
GH54 a-l-arabinofuranosidase soaked with aziridine inhibitor [Aspergillus luchuensis IFO 4308]
3.15e-141 23 329 2 316
E221Q mutant of GH54 a-l-arabinofuranosidase soaked with 4-nitrophenyl a-l-arabinofuranoside [Aspergillus luchuensis IFO 4308]
8.96e-141 23 329 2 316
Chain A, alpha-L-arabinofuranosidase B [Aspergillus luchuensis],2D44_A Chain A, alpha-L-arabinofuranosidase B [Aspergillus luchuensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.03e-160 10 331 14 343
Probable alpha-L-arabinofuranosidase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=abfB PE=3 SV=1
3.32e-158 9 330 13 342
Probable alpha-L-arabinofuranosidase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=abfB PE=3 SV=1
4.71e-158 9 330 13 342
Alpha-L-arabinofuranosidase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=abfB PE=1 SV=1
5.47e-158 6 330 5 336
Alpha-L-arabinofuranosidase OS=Hypocrea jecorina OX=51453 GN=abf1 PE=2 SV=1
1.90e-157 10 330 14 342
Probable alpha-L-arabinofuranosidase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=abfB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.004493 0.995471 CS pos: 29-30. Pr: 0.8342

TMHMM  Annotations      help

There is no transmembrane helices in SMR50302.1.