logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SMAC_10286-t26_1-p1

You are here: Home > Sequence: SMAC_10286-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sordaria macrospora
Lineage Ascomycota; Sordariomycetes; ; Sordariaceae; Sordaria; Sordaria macrospora
CAZyme ID SMAC_10286-t26_1-p1
CAZy Family GT48
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
321 34867.17 9.9518
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Smacrosporak-hell 11311 771870 484 10827
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4:19 3.2.1.91:5 3.2.1.73:3 3.2.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH9 81 316 2.1e-23 0.5406698564593302

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395616 Glyco_hydro_9 1.09e-06 190 256 167 237
Glycosyl hydrolase family 9.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.02e-11 87 311 204 443
1.35e-09 84 292 234 428
1.35e-09 84 292 234 428
2.42e-09 62 255 222 394
4.02e-09 162 255 22 119

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.37e-07 170 250 286 373
Chain A, Cellobiohydrolase [Acetivibrio thermocellus]
2.37e-07 170 250 286 373
Chain A, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.54e-08 84 310 240 454
Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2
1.37e-06 170 250 493 580
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1
1.37e-06 170 250 493 580
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000057 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in SMAC_10286-t26_1-p1.