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CAZyme Information: SMAC_08837-t26_1-p1

You are here: Home > Sequence: SMAC_08837-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sordaria macrospora
Lineage Ascomycota; Sordariomycetes; ; Sordariaceae; Sordaria; Sordaria macrospora
CAZyme ID SMAC_08837-t26_1-p1
CAZy Family GT15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
500 NW_003546096|CGC1 53273.34 6.7418
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Smacrosporak-hell 11311 771870 484 10827
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:3 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 46 493 1.7e-185 0.9796839729119639

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 4.68e-20 48 453 36 413
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
307945 Glyco_hydro_30 5.36e-11 160 401 97 348
Glycosyl hydrolase family 30 TIM-barrel domain.
405300 Glyco_hydr_30_2 4.56e-08 47 364 3 356
O-Glycosyl hydrolase family 30.
407314 Glyco_hydro_30C 7.42e-08 404 449 1 47
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.58e-231 40 493 13 459
3.72e-227 11 493 8 466
4.93e-219 11 493 8 451
3.85e-206 11 493 8 440
5.45e-162 37 493 19 470

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.57e-153 37 499 1 453
Chain AAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
3.28e-153 46 499 3 446
Chain A, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
9.24e-112 48 436 24 412
Chain A, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
7.68e-111 48 436 95 483
Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]
1.83e-109 47 437 24 399
Chain A, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.70e-155 35 499 16 470
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
7.37e-13 48 435 87 481
Putative glucosylceramidase 1 OS=Caenorhabditis elegans OX=6239 GN=gba-1 PE=1 SV=2
8.13e-11 48 436 55 443
Endo-1,6-beta-D-glucanase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=neg-1 PE=1 SV=2
8.32e-10 49 432 88 476
Putative glucosylceramidase 2 OS=Caenorhabditis elegans OX=6239 GN=gba-2 PE=3 SV=2
6.94e-07 47 410 92 459
Putative glucosylceramidase 3 OS=Caenorhabditis elegans OX=6239 GN=gba-3 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000317 0.999645 CS pos: 22-23. Pr: 0.9726

TMHMM  Annotations      help

There is no transmembrane helices in SMAC_08837-t26_1-p1.