logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SMAC_07994-t26_1-p1

You are here: Home > Sequence: SMAC_07994-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sordaria macrospora
Lineage Ascomycota; Sordariomycetes; ; Sordariaceae; Sordaria; Sordaria macrospora
CAZyme ID SMAC_07994-t26_1-p1
CAZy Family GH72
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
327 34613.82 5.1866
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Smacrosporak-hell 11311 771870 484 10827
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SMAC_07994-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH12 141 277 3e-25 0.8525641025641025

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396303 Glyco_hydro_12 7.68e-14 53 275 4 202
Glycosyl hydrolase family 12.
235746 PRK06215 1.14e-10 6 275 5 233
hypothetical protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.94e-110 29 304 17 292
6.94e-110 29 304 17 292
1.39e-109 29 304 17 292
8.36e-88 35 324 1 287
2.46e-67 18 271 5 234

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.11e-18 38 272 2 212
Chain A, ENDO-BETA-1-4-GLUCANASE [Trichoderma citrinoviride],1OA3_B Chain B, ENDO-BETA-1-4-GLUCANASE [Trichoderma citrinoviride],1OA3_C Chain C, ENDO-BETA-1-4-GLUCANASE [Trichoderma citrinoviride],1OA3_D Chain D, ENDO-BETA-1-4-GLUCANASE [Trichoderma citrinoviride]
2.50e-09 36 291 1 232
STREPTOMYCES LIVIDANS ENDOGLUCANASE (EC: 3.2.1.4) COMPLEX WITH MODIFIED GLUCOSE TRIMER [Streptomyces lividans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.29e-16 37 279 40 256
Endoglucanase cel12C OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=cel12C PE=3 SV=1
2.76e-15 40 272 24 233
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xgeA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000410 0.999557 CS pos: 34-35. Pr: 0.9561

TMHMM  Annotations      help

There is no transmembrane helices in SMAC_07994-t26_1-p1.