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CAZyme Information: SMAC_05833-t26_1-p1

You are here: Home > Sequence: SMAC_05833-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sordaria macrospora
Lineage Ascomycota; Sordariomycetes; ; Sordariaceae; Sordaria; Sordaria macrospora
CAZyme ID SMAC_05833-t26_1-p1
CAZy Family GH25
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
174 18885.52 8.4784
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Smacrosporak-hell 11311 771870 484 10827
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SMAC_05833-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 53 170 2.8e-18 0.601063829787234

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395527 Ricin_B_lectin 2.97e-15 53 165 21 126
Ricin-type beta-trefoil lectin domain.
238092 RICIN 1.12e-13 53 165 19 122
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
395527 Ricin_B_lectin 2.38e-13 86 165 8 82
Ricin-type beta-trefoil lectin domain.
214672 RICIN 2.67e-12 54 165 15 115
Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication.
238092 RICIN 2.75e-11 85 165 6 80
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.07e-29 27 171 21 169
6.50e-20 12 173 11 168
1.46e-15 5 166 4 166
3.06e-11 72 174 71 174
1.94e-09 40 120 31 113

PDB Hits      help

SMAC_05833-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

SMAC_05833-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000229 0.999740 CS pos: 19-20. Pr: 0.9723

TMHMM  Annotations      help

There is no transmembrane helices in SMAC_05833-t26_1-p1.