logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SMAC_04106-t26_1-p1

You are here: Home > Sequence: SMAC_04106-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sordaria macrospora
Lineage Ascomycota; Sordariomycetes; ; Sordariaceae; Sordaria; Sordaria macrospora
CAZyme ID SMAC_04106-t26_1-p1
CAZy Family GH13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
230 24828.22 9.7038
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Smacrosporak-hell 11311 771870 484 10827
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SMAC_04106-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA9 7 214 1.6e-66 0.9772727272727273

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397484 Glyco_hydro_61 1.13e-77 18 220 1 211
Glycosyl hydrolase family 61. Although weak endoglucanase activity has been demonstrated in several members of this family, they lack the clustered conserved catalytic acidic amino acids present in most glycoside hydrolases. Many members of this family lack measurable cellulase activity on their own, but enhance the activity of other cellulolytic enzymes. They are therefore unlikely to be true glycoside hydrolases. The subsrate-binding surface of this family is a flat Ig-like fold.
410622 LPMO_AA9 3.49e-77 17 228 1 216
lytic polysaccharide monooxygenase (LPMO) auxiliary activity family 9 (AA9). AA9 proteins are copper-dependent lytic polysaccharide monooxygenases (LPMOs) involved in the cleavage of cellulose chains with oxidation of carbons C1 and/or C4 and C6. Activities include lytic cellulose monooxygenase (C1-hydroxylating) (EC 1.14.99.54) and lytic cellulose monooxygenase (C4-dehydrogenating) (EC 1.14.99.56). The family used to be called GH61 because weak endoglucanase activity had been demonstrated in some family members.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.38e-135 1 228 1 228
1.03e-129 1 229 1 229
4.00e-118 1 229 1 230
8.07e-118 1 229 1 230
8.07e-118 1 229 1 230

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.44e-54 17 228 1 206
Zinc-bound glycoside hydrolase 61 E from Thielavia terrestris [Thermothielavioides terrestris],3EII_B Zinc-bound glycoside hydrolase 61 E from Thielavia terrestris [Thermothielavioides terrestris],3EII_C Zinc-bound glycoside hydrolase 61 E from Thielavia terrestris [Thermothielavioides terrestris],3EII_D Zinc-bound glycoside hydrolase 61 E from Thielavia terrestris [Thermothielavioides terrestris],3EJA_A Magnesium-bound glycoside hydrolase 61 isoform E from Thielavia terrestris [Thermothielavioides terrestris],3EJA_B Magnesium-bound glycoside hydrolase 61 isoform E from Thielavia terrestris [Thermothielavioides terrestris],3EJA_C Magnesium-bound glycoside hydrolase 61 isoform E from Thielavia terrestris [Thermothielavioides terrestris],3EJA_D Magnesium-bound glycoside hydrolase 61 isoform E from Thielavia terrestris [Thermothielavioides terrestris]
4.15e-54 17 228 1 212
Lytic polysaccharide monooxygenase 9F from Neurospora crassa, NcLPMO9F [Neurospora crassa],4QI8_B Lytic polysaccharide monooxygenase 9F from Neurospora crassa, NcLPMO9F [Neurospora crassa]
9.42e-51 17 229 1 216
Chain A, GLYCOSIDE HYDROLASE FAMILY 61 PROTEIN D [Phanerodontia chrysosporium],4B5Q_B Chain B, GLYCOSIDE HYDROLASE FAMILY 61 PROTEIN D [Phanerodontia chrysosporium]
4.27e-49 17 229 1 216
Chain A, Glycoside hydrolase family 61 protein [Gelatoporia subvermispora B],7EXK_B Chain B, Glycoside hydrolase family 61 protein [Gelatoporia subvermispora B],7EXK_C Chain C, Glycoside hydrolase family 61 protein [Gelatoporia subvermispora B],7EXK_D Chain D, Glycoside hydrolase family 61 protein [Gelatoporia subvermispora B],7EXK_E Chain E, Glycoside hydrolase family 61 protein [Gelatoporia subvermispora B],7EXK_F Chain F, Glycoside hydrolase family 61 protein [Gelatoporia subvermispora B]
2.50e-25 17 215 1 206
Crystal structure of the catalytic domain of NcLPMO9A [Neurospora crassa OR74A]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.65e-22 52 230 71 256
Cellulose-growth-specific protein OS=Agaricus bisporus OX=5341 GN=cel1 PE=3 SV=1
1.68e-19 10 228 14 235
Probable endo-beta-1,4-glucanase D OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=eglD PE=3 SV=1
3.24e-19 10 228 14 235
Probable endo-beta-1,4-glucanase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=eglD PE=3 SV=1
6.26e-18 10 227 15 242
Polysaccharide monooxygenase Cel61a OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Cel61a PE=1 SV=1
2.36e-17 86 228 101 232
Probable endo-beta-1,4-glucanase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=eglD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000239 0.999740 CS pos: 16-17. Pr: 0.9455

TMHMM  Annotations      help

There is no transmembrane helices in SMAC_04106-t26_1-p1.