CAZyme Information: SDRG_17175-t26_1-p1

Basic Information

• Species: Saprolegnia diclina
• Lineage: Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
• CAZyme ID: SDRG_17175-t26_1-p1
• CAZy Family: GT60
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
872		93180.78	6.5011

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_SdiclinaVS20	17448	1156394	89	17359

• Gene Location: location=JH767339:5022-7778(-)

Full Sequence      

MQWSLLASITAVAAAQNATAYNDLDARAEAIITAMTPHQWIAQMAQINIGYITYPDGSLN
EAAVAQCARIGVGAFLNGFLNVHQWRAMISRIQAIYAQHHVAPVLYGLDSLHGANYVHGA
VMGPQQINNGATFNPSLVSGFGAITARDLAAAGVNWALAPGLDIAQHKRWPRVYETFGED
PYLTSELGVAAVHGIQSVRSVAATFKHFGAYGASATGDDLGTAFVSEYELLNYYTPSFTA
AIRAGIRSGMTGYASINDVPMVVNEKMTVDLLRHDMGFDGVLVTDWEDIYHLNFVHHLVN
SNMEAVRVAMTKSSVDVSMVPYDASFVGYAESLLKAGKLPASRFRASAKRVIKMKLQLGL
FDAPMHGADDVARVGSNEDRDAALAIARESIVLLQNRENVLPLWNEPRLFLTGPSVDNIG
YLCGGWTWEWQGRSDNSVFAGSQSIRAAFASLYKDPSRLSFLPGIDIQGSHVGNYSSALD
KARAAEYAVIVVGEAPYAESFGNIKDATLPAGQLQYIRDIASTGTKVILVLVEGRPRLLN
GVADVVHAVIDAMLPCHMGGQAIAEIILGLTNPSGRLSMTYPKDQTKDNMVTPYFQRKNG
VCVLTGAACPAEWEFGTGLSYTTFSYTNFALSANQLNTSAESLTASVVVTNTGTMAGKEA
VLLFLSQGARTSGTPETKMLKKFTKVSLSPGQSTTVTFSIGFNDFAIYNGGIGSGLLKSA
EAGAYYVGVKPETVCDANTIGTLCQAFAYAPKTLLAQVFHLHDRSSESASVVAGHGHALT
IPERLVGLLGNLPSVNNWVLDAVHNTLSIVGSGLCLGLGAEGLGLGDCSTPTKHQQWRHD
AATGQLRHLAQVDHCLHATDNDLVLAACHVTT

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	102	319	3.4e-57	0.9537037037037037

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	2.91e-95	23	727	33	748	beta-glucosidase BglX.
224389	BglX	5.16e-66	35	459	1	397	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747	Glyco_hydro_3	2.49e-52	41	352	6	314	Glycosyl hydrolase family 3 N terminal domain.
178629	PLN03080	1.19e-50	109	700	89	742	Probable beta-xylosidase; Provisional
396478	Glyco_hydro_3_C	8.18e-34	391	621	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AIG56284.1|GH3	0.0	22	812	18	795
AIG56285.1|CBM13|GH3	6.41e-306	22	756	19	752
AIG55751.1|CBM13|GH3	1.12e-301	20	862	17	864
AIG55915.1|CBM13|GH3	1.81e-301	5	749	7	747
AIG55725.1|GH3	6.51e-284	1	568	1	564

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	5.72e-118	35	706	24	720	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
5M6G_A	3.54e-73	103	581	123	587	Crystal structure Glucan 1,4-beta-glucosidase from Saccharopolyspora erythraea [Saccharopolyspora erythraea D]
6R5I_A	1.87e-71	31	727	10	716	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	9.18e-71	31	727	10	716	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	9.35e-71	31	727	11	717	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	1.90e-129	31	706	83	792	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	4.19e-117	35	706	46	742	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|T2KMH0|PLH24_FORAG	2.79e-75	101	736	65	713	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
sp|P33363|BGLX_ECOLI	8.46e-75	25	709	35	734	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|Q56078|BGLX_SALTY	2.08e-73	25	734	35	757	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000520	0.999459	CS pos: 15-16. Pr: 0.8964

TMHMM  Annotations     

There is no transmembrane helices in SDRG_17175-t26_1-p1.