logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SDRG_16707-t26_1-p1

You are here: Home > Sequence: SDRG_16707-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_16707-t26_1-p1
CAZy Family GT49
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
227 25256.17 8.6107
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.2:130

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH14 25 197 3.8e-57 0.41504854368932037

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178400 PLN02803 1.80e-59 21 197 86 261
beta-amylase
215431 PLN02801 2.54e-54 21 197 16 192
beta-amylase
215099 PLN00197 5.20e-54 21 197 106 281
beta-amylase; Provisional
366599 Glyco_hydro_14 1.25e-45 25 197 2 161
Glycosyl hydrolase family 14. This family are beta amylases.
178493 PLN02905 3.41e-37 21 207 265 452
beta-amylase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.82e-103 1 197 10 207
7.54e-101 17 197 17 197
1.58e-100 17 197 17 197
2.24e-97 20 197 20 197
6.95e-89 13 197 10 198

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.29e-42 21 197 12 188
Chain A, Beta-amylase [Glycine max]
5.29e-42 21 197 12 188
Chain A, Beta-amylase [Glycine max],1UKO_B Chain B, Beta-amylase [Glycine max],1UKO_C Chain C, Beta-amylase [Glycine max],1UKO_D Chain D, Beta-amylase [Glycine max]
5.29e-42 21 197 12 188
Chain A, Beta-amylase [Glycine max],1UKP_B Chain B, Beta-amylase [Glycine max],1UKP_C Chain C, Beta-amylase [Glycine max],1UKP_D Chain D, Beta-amylase [Glycine max]
5.29e-42 21 197 12 188
Chain A, beta-amylase [Glycine max]
5.29e-42 21 197 12 188
Chain A, Beta-amylase [Glycine max]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.52e-48 21 197 93 269
Beta-amylase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BAMY2 PE=1 SV=1
5.03e-48 18 197 83 261
Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3
4.37e-46 21 197 73 249
Beta-amylase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BAMY1 PE=1 SV=1
5.47e-43 21 197 106 281
Beta-amylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1
3.85e-41 21 197 13 189
Beta-amylase OS=Medicago sativa OX=3879 GN=BMY1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000298 0.999662 CS pos: 19-20. Pr: 0.9716

TMHMM  Annotations      download full data without filtering help

Start End
7 29