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CAZyme Information: SDRG_16677-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Saprolegnia diclina | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina | |||||||||||
| CAZyme ID | SDRG_16677-t26_1-p1 | |||||||||||
| CAZy Family | GT48 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 2.4.1.34:28 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT48 | 842 | 1568 | 5.7e-260 | 0.9472259810554804 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 396784 | Glucan_synthase | 4.62e-173 | 843 | 1535 | 3 | 712 | 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
| 405046 | FKS1_dom1 | 6.52e-37 | 142 | 246 | 5 | 106 | 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. |
| 340917 | MFS_XylE_like | 3.11e-13 | 1801 | 2124 | 47 | 324 | D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. |
| 395036 | Sugar_tr | 6.83e-13 | 1736 | 2174 | 2 | 436 | Sugar (and other) transporter. |
| 340916 | MFS_GLUT6_8_Class3_like | 4.96e-12 | 1920 | 2176 | 155 | 413 | Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 63 | 2246 | 96 | 2296 | |
| 0.0 | 15 | 2239 | 19 | 2270 | |
| 0.0 | 34 | 2240 | 17 | 2316 | |
| 0.0 | 27 | 2204 | 2 | 2239 | |
| 0.0 | 14 | 2242 | 10 | 2221 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.25e-07 | 1804 | 2124 | 52 | 365 | The inward-facing structure of the glucose transporter from Staphylococcus epidermidis [Staphylococcus epidermidis ATCC 12228],4LDS_B The inward-facing structure of the glucose transporter from Staphylococcus epidermidis [Staphylococcus epidermidis ATCC 12228] |
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| 3.69e-06 | 1784 | 2128 | 76 | 431 | Crystal structure of a double Trp XylE mutants (G58W/L315W) [Escherichia coli] |
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| 6.03e-06 | 1784 | 2128 | 48 | 403 | Crystal structure of D-xylose-proton symporter [Escherichia coli K-12] |
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| 6.09e-06 | 1784 | 2128 | 49 | 404 | Partially occluded inward open conformation of the xylose transporter XylE from E. coli [Escherichia coli K-12],4JA3_B Partially occluded inward open conformation of the xylose transporter XylE from E. coli [Escherichia coli K-12],4JA4_A Inward open conformation of the xylose transporter XylE from E. coli [Escherichia coli K-12],4JA4_B Inward open conformation of the xylose transporter XylE from E. coli [Escherichia coli K-12],4JA4_C Inward open conformation of the xylose transporter XylE from E. coli [Escherichia coli K-12] |
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| 6.15e-06 | 1784 | 2128 | 49 | 404 | The structure of the MFS (major facilitator superfamily) proton:xylose symporter XylE bound to D-xylose [Escherichia coli K-12],4GBZ_A The structure of the MFS (major facilitator superfamily) proton:xylose symporter XylE bound to D-glucose [Escherichia coli K-12],4GC0_A The structure of the MFS (major facilitator superfamily) proton:xylose symporter XylE bound to 6-bromo-6-deoxy-D-glucose [Escherichia coli K-12] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.55e-226 | 64 | 1724 | 256 | 1915 | Callose synthase 7 OS=Arabidopsis thaliana OX=3702 GN=CALS7 PE=3 SV=3 |
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| 1.12e-223 | 47 | 1724 | 229 | 1910 | Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1 |
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| 1.27e-219 | 40 | 1724 | 228 | 1903 | Putative callose synthase 6 OS=Arabidopsis thaliana OX=3702 GN=CALS6 PE=3 SV=2 |
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| 5.97e-219 | 35 | 1724 | 220 | 1931 | Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2 |
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| 8.96e-219 | 64 | 1724 | 251 | 1875 | Callose synthase 9 OS=Arabidopsis thaliana OX=3702 GN=CALS9 PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000051 | 0.000000 |
TMHMM Annotations download full data without filtering help
| Start | End |
|---|---|
| 275 | 297 |
| 327 | 349 |
| 362 | 384 |
| 399 | 421 |
| 454 | 476 |
| 501 | 518 |
| 523 | 542 |
| 1275 | 1297 |
| 1330 | 1352 |
| 1356 | 1373 |
| 1422 | 1444 |
| 1479 | 1501 |
| 1566 | 1597 |
| 1617 | 1639 |
| 1652 | 1674 |
| 1684 | 1706 |
| 1737 | 1759 |
| 1796 | 1818 |
| 1823 | 1842 |
| 1847 | 1869 |
| 1882 | 1904 |
| 1919 | 1941 |
| 1994 | 2016 |
| 2031 | 2050 |
| 2062 | 2081 |
| 2096 | 2118 |
| 2131 | 2149 |
| 2154 | 2176 |