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CAZyme Information: SDRG_15885-t26_1-p1

You are here: Home > Sequence: SDRG_15885-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_15885-t26_1-p1
CAZy Family GT4
CAZyme Description endo-1,4-beta-xylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
178 19128.08 8.2508
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:61

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH11 29 169 1.2e-53 0.768361581920904

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395367 Glyco_hydro_11 5.57e-70 29 161 1 129
Glycosyl hydrolases family 11.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.13e-79 1 161 1 160
2.82e-78 8 161 7 161
3.61e-75 1 161 1 160
8.65e-71 21 169 34 179
1.14e-69 9 169 27 183

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.04e-67 17 169 2 151
High resolution structure of GH11 xylanase from Nectria haematococca [Fusarium vanettenii 77-13-4]
1.21e-65 21 169 7 151
Crystal Structure of a Xylanase at 1.56 Angstroem resolution [Fusarium oxysporum],5JRN_A Crystal Structure of a Xylanase in Complex with a Monosaccharide at 2.84 Angstroem resolution [Fusarium oxysporum f. sp. vasinfectum 25433]
4.19e-59 21 169 7 149
Chain A, Endo-1,4-beta-xylanase [Actinomycetia bacterium],7EO6_B Chain B, Endo-1,4-beta-xylanase [Actinomycetia bacterium]
1.45e-58 25 169 7 148
HIGH-RESOLUTION STRUCTURES OF XYLANASES FROM B. CIRCULANS AND T. HARZIANUM IDENTIFY A NEW FOLDING PATTERN AND IMPLICATIONS FOR THE ATOMIC BASIS OF THE CATALYSIS [Trichoderma harzianum]
1.45e-58 21 169 5 147
Crystallographic Analyses Of Family 11 Endo-Beta-1,4- Xylanase Xyl1 From Streptomyces Sp. S38 [Streptomyces sp. S38],1HIX_B Crystallographic Analyses Of Family 11 Endo-Beta-1,4- Xylanase Xyl1 From Streptomyces Sp. S38 [Streptomyces sp. S38]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.02e-70 9 169 27 183
Endo-1,4-beta-xylanase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xlnA PE=1 SV=1
2.56e-69 19 169 40 186
Endo-1,4-beta-xylanase xynf11a OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=xlnA PE=1 SV=1
2.56e-69 19 169 40 186
Probable endo-1,4-beta-xylanase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=xlnA PE=3 SV=1
7.31e-69 20 169 41 186
Probable endo-1,4-beta-xylanase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xlnA PE=3 SV=1
3.57e-66 21 169 39 183
Endo-1,4-beta-xylanase B OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=xlnB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000189 0.999792 CS pos: 20-21. Pr: 0.7521

TMHMM  Annotations      download full data without filtering help

Start End
4 26