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CAZyme Information: SDRG_15701-t26_1-p1

You are here: Home > Sequence: SDRG_15701-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_15701-t26_1-p1
CAZy Family GT4
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
450 49205.50 5.9140
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.2:130

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH14 24 435 5.4e-123 0.970873786407767

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178400 PLN02803 2.40e-122 20 450 86 510
beta-amylase
215431 PLN02801 6.27e-114 20 434 16 428
beta-amylase
215099 PLN00197 1.06e-112 20 448 106 534
beta-amylase; Provisional
366599 Glyco_hydro_14 4.20e-98 24 433 2 388
Glycosyl hydrolase family 14. This family are beta amylases.
178493 PLN02905 3.53e-95 20 447 265 692
beta-amylase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 450 1 450
0.0 1 450 1 450
5.53e-222 3 448 4 444
8.63e-219 20 448 21 444
4.95e-211 8 450 18 456

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.73e-90 20 406 12 384
Chain A, beta-amylase [Glycine max]
1.34e-89 20 406 12 384
Beta-AmylaseBETA-Cyclodextrin Complex [Glycine max],1Q6C_A Crystal Structure of Soybean Beta-Amylase Complexed with Maltose [Glycine max],1WDP_A The role of an inner loop in the catalytic mechanism of soybean beta-amylase [Glycine max]
1.88e-89 20 406 12 384
Chain A, Beta-amylase [Glycine max],1UKO_B Chain B, Beta-amylase [Glycine max],1UKO_C Chain C, Beta-amylase [Glycine max],1UKO_D Chain D, Beta-amylase [Glycine max]
1.88e-89 20 406 12 384
Chain A, Beta-amylase [Glycine max],1UKP_B Chain B, Beta-amylase [Glycine max],1UKP_C Chain C, Beta-amylase [Glycine max],1UKP_D Chain D, Beta-amylase [Glycine max]
2.16e-89 20 406 6 378
Chain A, PROTEIN (BETA-AMYLASE) [Hordeum vulgare]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.08e-98 18 450 84 510
Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3
1.69e-96 20 448 93 518
Beta-amylase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BAMY2 PE=1 SV=1
2.88e-95 20 444 73 495
Beta-amylase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BAMY1 PE=1 SV=1
1.11e-91 20 448 106 536
Beta-amylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1
1.44e-88 20 406 10 382
Beta-amylase OS=Hordeum vulgare OX=4513 GN=BMY1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000527 0.999444 CS pos: 18-19. Pr: 0.9034

TMHMM  Annotations      help

There is no transmembrane helices in SDRG_15701-t26_1-p1.