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CAZyme Information: SDRG_15066-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Saprolegnia diclina | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina | |||||||||||
| CAZyme ID | SDRG_15066-t26_1-p1 | |||||||||||
| CAZy Family | GT30 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 2 | 102 | 7.5e-29 | 0.5294117647058824 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 3.03e-09 | 8 | 100 | 100 | 184 | Amb_all domain. |
| 366158 | Pec_lyase_C | 0.003 | 6 | 100 | 121 | 209 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 8.64e-97 | 1 | 186 | 209 | 394 | |
| 1.18e-89 | 1 | 186 | 211 | 396 | |
| 8.48e-65 | 1 | 135 | 211 | 345 | |
| 1.82e-43 | 1 | 186 | 214 | 398 | |
| 1.82e-43 | 1 | 186 | 214 | 398 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.85e-20 | 10 | 165 | 187 | 340 | Pectin Lyase A [Aspergillus niger] |
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| 3.35e-19 | 2 | 184 | 179 | 358 | Pectin Lyase B [Aspergillus niger] |
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| 8.21e-18 | 10 | 165 | 187 | 340 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.90e-35 | 9 | 186 | 208 | 383 | Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1 |
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| 5.90e-35 | 9 | 186 | 208 | 383 | Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1 |
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| 8.81e-33 | 9 | 186 | 207 | 382 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
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| 8.81e-33 | 9 | 186 | 207 | 382 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 1.01e-27 | 9 | 145 | 206 | 339 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.998990 | 0.001030 |