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CAZyme Information: SDRG_13290-t26_1-p1

You are here: Home > Sequence: SDRG_13290-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_13290-t26_1-p1
CAZy Family GT19
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
741 JH767189|CGC2 86051.16 8.1048
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SDRG_13290-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT90 270 607 5.7e-29 0.96

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214773 CAP10 4.39e-24 270 602 2 242
Putative lipopolysaccharide-modifying enzyme.
310354 Glyco_transf_90 9.53e-14 270 619 79 329
Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.92e-308 28 670 7 662
1.43e-148 29 665 10 608
2.77e-106 53 609 24 505
5.80e-67 146 609 81 521
5.80e-67 146 609 81 521

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.75e-13 270 619 94 348
human POGLUT1 in complex with Notch1 EGF12 and UDP [Homo sapiens],5L0S_A human POGLUT1 in complex with Factor VII EGF1 and UDP [Homo sapiens],5L0T_A human POGLUT1 in complex with EGF(+) and UDP [Homo sapiens],5L0U_A human POGLUT1 in complex with EGF(+) and UDP-phosphono-glucose [Homo sapiens],5L0V_A human POGLUT1 in complex with 2F-glucose modified EGF(+) and UDP [Homo sapiens],5UB5_A human POGLUT1 in complex with human Notch1 EGF12 S458T mutant and UDP [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.19e-68 146 609 81 521
Uncharacterized protein 179R OS=Invertebrate iridescent virus 6 OX=176652 GN=IIV6-179R PE=4 SV=1
3.60e-55 153 613 96 493
Uncharacterized protein 035R OS=Invertebrate iridescent virus 3 OX=345201 GN=IIV3-035R PE=4 SV=1
1.18e-33 153 597 42 430
Uncharacterized protein 027R OS=Frog virus 3 (isolate Goorha) OX=654924 GN=FV3-027R PE=4 SV=1
2.87e-14 268 619 120 376
Protein O-glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Poglut1 PE=3 SV=1
1.20e-12 267 619 120 376
Protein O-glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Poglut1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000095 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in SDRG_13290-t26_1-p1.