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CAZyme Information: SDRG_12011-t26_1-p1

You are here: Home > Sequence: SDRG_12011-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_12011-t26_1-p1
CAZy Family GH6
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
561 60085.72 6.6832
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SDRG_12011-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 58 548 7.7e-80 0.8873239436619719

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 3.33e-61 53 548 2 474
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 6.92e-54 58 539 5 464
choline dehydrogenase; Validated
366272 GMC_oxred_N 4.29e-20 141 362 24 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 8.86e-19 59 361 56 328
Protein HOTHEAD
223717 FixC 1.38e-06 57 92 2 36
Dehydrogenase (flavoprotein) [Energy production and conversion].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.82e-128 59 561 83 594
1.15e-44 58 539 5 457
2.85e-42 55 544 46 536
2.21e-37 58 439 47 413
2.21e-37 58 439 47 413

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.02e-34 58 535 7 487
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
9.50e-34 58 535 7 487
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
9.50e-34 58 535 7 487
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
9.50e-34 58 535 7 487
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
1.08e-33 58 535 23 503
Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.77e-42 59 539 2 460
Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1
1.26e-39 58 535 6 462
4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1
1.20e-37 59 536 2 457
Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans OX=301 GN=alkJ PE=1 SV=1
1.79e-37 58 439 47 413
Ecdysone oxidase OS=Bombyx mori OX=7091 GN=EO PE=1 SV=1
5.75e-37 58 548 4 470
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.993904 0.006107

TMHMM  Annotations      download full data without filtering help

Start End
29 48