dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: SDRG_11319-t26_1-p1

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Basic Information help

Species

Saprolegnia diclina

Lineage

Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina

CAZyme ID

SDRG_11319-t26_1-p1

CAZy Family

GH5

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
357		37741.86	4.7918

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_SdiclinaVS20	17448	1156394	89	17359

Gene Location

Full Sequence Download help

Enzyme Prediction help

EC	3.2.1.14:12	3.2.1.-:1

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH18	104	284	4.7e-22	0.49324324324324326

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
119349	GH18_chitinase-like	2.52e-17	104	265	21	178	The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model.
395573	Glyco_hydro_18	2.86e-17	93	264	9	176	Glycosyl hydrolases family 18.
214753	Glyco_18	7.43e-14	104	263	23	184	Glyco_18 domain.
119365	GH18_chitinase	2.30e-13	107	263	26	209	The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
119350	GH18_chitinase_D-like	3.23e-10	103	264	24	194	GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
2.93e-27	75	328	69	337
1.71e-06	142	301	113	255
1.71e-06	142	301	113	255
1.71e-06	142	301	113	255
1.71e-06	142	301	113	255

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7.55e-07	142	283	102	242	The crystal structure of a chitinase CrChi1 from the nematophagous fungus Clonostachys rosea [Clonostachys rosea],3G6M_A crystal structure of a chitinase CrChi1 from the nematophagous fungus Clonostachys rosea in complex with a potent inhibitor caffeine [Clonostachys rosea]

Swiss-Prot Hits help

SDRG_11319-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999943	0.000066

TMHMM Annotations download full data without filtering help

Start	End
35	57