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CAZyme Information: SDRG_10901-t26_1-p1

You are here: Home > Sequence: SDRG_10901-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_10901-t26_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
764 JH767169|CGC2 82305.89 6.6824
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SDRG_10901-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 204 711 2.6e-49 0.5129449838187702

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
366272 GMC_oxred_N 3.09e-57 267 466 15 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
225186 BetA 7.46e-30 223 706 25 536
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 1.88e-22 551 697 5 141
GMC oxidoreductase. This domain found associated with pfam00732.
235000 PRK02106 5.84e-04 644 682 473 510
choline dehydrogenase; Validated
274143 pyranose_ox 0.003 644 707 483 546
pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.39e-108 62 718 91 744
1.35e-07 207 513 55 391
1.80e-07 205 700 63 636
4.72e-06 202 704 30 607
7.56e-06 209 704 8 515

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.16e-06 205 704 8 536
Crystal structure of gamma-alpha subunit complex from Burkholderia cepacia FAD glucose dehydrogenase [Burkholderia cepacia],6A2U_D Crystal structure of gamma-alpha subunit complex from Burkholderia cepacia FAD glucose dehydrogenase [Burkholderia cepacia]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.34e-97 92 700 98 737
Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus OX=34305 GN=FAO1 PE=1 SV=1
3.34e-95 86 707 96 746
Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus OX=34305 GN=FAO2 PE=2 SV=1
1.66e-93 90 700 91 733
Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana OX=3702 GN=FAO3 PE=1 SV=1
3.15e-89 202 699 220 714
Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana OX=3702 GN=FAO4A PE=3 SV=2
7.08e-89 192 700 225 735
Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana OX=3702 GN=FAO4B PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000048 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in SDRG_10901-t26_1-p1.