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CAZyme Information: SDRG_08129-t26_1-p1

You are here: Home > Sequence: SDRG_08129-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_08129-t26_1-p1
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
218 23401.61 7.8438
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SDRG_08129-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 12 195 3.4e-72 0.726530612244898

CDD Domains      help

SDRG_08129-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.58e-167 1 218 1 218
4.29e-163 1 218 65 282
5.27e-147 1 217 63 277
1.11e-145 1 217 1 225
9.17e-117 9 205 11 199

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.05e-34 19 186 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

SDRG_08129-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.272083 0.727899 CS pos: 23-24. Pr: 0.5227

TMHMM  Annotations      help

There is no transmembrane helices in SDRG_08129-t26_1-p1.