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CAZyme Information: SDRG_07565-t26_1-p1

You are here: Home > Sequence: SDRG_07565-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_07565-t26_1-p1
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
278 JH767153|CGC1 29943.02 7.5910
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SDRG_07565-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 70 262 3.1e-72 0.7510204081632653

CDD Domains      help

SDRG_07565-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.50e-211 1 278 1 278
7.05e-171 1 277 3 281
2.81e-150 63 278 1 226
7.83e-146 63 277 1 217
5.94e-112 77 266 17 200

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.23e-32 81 248 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

SDRG_07565-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000049 0.000009

TMHMM  Annotations      help

There is no transmembrane helices in SDRG_07565-t26_1-p1.