dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: SDRG_07401-t26_1-p1

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Basic Information help

Species

Saprolegnia diclina

Lineage

Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina

CAZyme ID

SDRG_07401-t26_1-p1

CAZy Family

GH18

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
377		41504.46	6.2895

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_SdiclinaVS20	17448	1156394	89	17359

Gene Location

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in SDRG_07401-t26_1-p1.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH18	177	368	2.6e-23	0.6824324324324325

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
119355	GH18_SI-CLP	1.58e-93	93	377	1	318	Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl hydrolase family 18 (GH18) domain but lacks a chitin-binding domain. The catalytic amino acids of the GH18 domain are not conserved in SI-CLP, similar to the chitolectins YKL-39, YKL-40, and YM1/2. Human SI-CLP is sorted to late endosomes and secretory lysosomes in alternatively activated macrophages.
119353	GH18_CFLE_spore_hydrolase	4.29e-17	94	377	1	313	Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
214753	Glyco_18	5.92e-11	98	368	3	333	Glyco_18 domain.
395573	Glyco_hydro_18	5.78e-08	245	368	159	306	Glycosyl hydrolases family 18.
226376	YaaH	1.76e-07	242	377	265	418	Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
3.93e-87	41	377	63	382
2.70e-73	74	368	500	801
2.83e-73	74	368	503	804
2.96e-73	74	368	506	807
2.96e-73	74	368	506	807

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1.18e-63	62	377	45	393	Crystal Structure of Stabilin-1 Interacting Chitinase-Like Protein, SI-CLP [Homo sapiens],3BXW_B Crystal Structure of Stabilin-1 Interacting Chitinase-Like Protein, SI-CLP [Homo sapiens]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
5.54e-64	62	377	45	393	Chitinase domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chid1 PE=2 SV=2
5.54e-64	62	377	45	393	Chitinase domain-containing protein 1 OS=Mus musculus OX=10090 GN=Chid1 PE=1 SV=1
6.06e-63	62	377	45	393	Chitinase domain-containing protein 1 OS=Pongo abelii OX=9601 GN=CHID1 PE=2 SV=1
6.06e-63	62	377	45	393	Chitinase domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CHID1 PE=1 SV=1
1.20e-62	65	377	48	393	Chitinase domain-containing protein 1 OS=Bos taurus OX=9913 GN=CHID1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000228	0.999740	CS pos: 24-25. Pr: 0.9734

TMHMM Annotations download full data without filtering help

Start	End
7	25