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CAZyme Information: SDRG_06561-t26_2-p1

You are here: Home > Sequence: SDRG_06561-t26_2-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_06561-t26_2-p1
CAZy Family GH18
CAZyme Description hypothetical protein, variant
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2303 JH767149|CGC1 239829.58 5.5141
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.80:2 3.2.1.26:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM38 1803 1977 1e-22 0.9612403100775194

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
316802 FG-GAP_2 1.29e-08 2033 2091 1 49
FG-GAP repeat.
316802 FG-GAP_2 3.08e-07 1759 1793 1 35
FG-GAP repeat.
316802 FG-GAP_2 1.01e-06 852 899 1 49
FG-GAP repeat.
397326 Calx-beta 1.84e-05 2172 2275 10 90
Calx-beta domain.
197594 Calx_beta 2.00e-04 2166 2269 4 86
Domains in Na-Ca exchangers and integrin-beta4. Domain in Na-Ca exchangers and integrin subunit beta4 (and some cyanobacterial proteins)

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.09e-27 1801 2000 68 229
2.11e-18 1803 1992 32 182
6.59e-16 1803 1991 32 181
1.20e-15 1803 2005 36 200
1.59e-15 1803 2008 39 206

PDB Hits      help

SDRG_06561-t26_2-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.49e-08 1901 2005 367 468
Putative glycosyl hydrolase ecdE OS=Aspergillus rugulosus OX=41736 GN=ecdE PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000013 0.000026

TMHMM  Annotations      help

There is no transmembrane helices in SDRG_06561-t26_2-p1.