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CAZyme Information: SDRG_06485-t26_1-p1

You are here: Home > Sequence: SDRG_06485-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_06485-t26_1-p1
CAZy Family GH17|CBM13|CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
607 JH767148|CGC3 66842.79 6.3702
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC - - -

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 363 514 1.9e-16 0.574468085106383

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227625 Scw11 6.48e-25 47 302 26 305
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
395527 Ricin_B_lectin 4.49e-22 387 555 4 126
Ricin-type beta-trefoil lectin domain.
238092 RICIN 1.61e-17 388 556 4 123
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
395527 Ricin_B_lectin 3.39e-17 372 464 29 125
Ricin-type beta-trefoil lectin domain.
395527 Ricin_B_lectin 3.15e-16 435 603 8 126
Ricin-type beta-trefoil lectin domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.75e-137 70 605 29 549
1.04e-135 70 607 18 560
6.64e-135 70 605 18 551
3.14e-120 66 607 14 508
1.96e-109 72 595 22 399

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.31e-08 80 313 53 281
Crystal structure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432]
5.25e-07 80 313 53 281
Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaribiose [Rhizomucor miehei CAU432],4WTS_A Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaritriose [Rhizomucor miehei CAU432]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.06e-08 71 268 283 494
Probable family 17 glucosidase SCW11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SCW11 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.970746 0.029256

TMHMM  Annotations      download full data without filtering help

Start End
30 52