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CAZyme Information: SDRG_02254-t26_1-p1

You are here: Home > Sequence: SDRG_02254-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_02254-t26_1-p1
CAZy Family CBM13|CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
540 JH767136|CGC1 61479.24 6.5030
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT60 48 363 1e-62 0.990909090909091

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371506 GlcNAc 5.45e-44 48 363 1 348
Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.85e-93 8 400 28 416
1.75e-91 17 428 40 455
1.97e-91 8 394 9 393
2.67e-83 18 396 41 418
5.82e-39 47 383 85 413

PDB Hits      help

SDRG_02254-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.52e-23 45 292 2 249
[Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase OS=Dictyostelium discoideum OX=44689 GN=gnt1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000066 0.000000

TMHMM  Annotations      download full data without filtering help

Start End
498 520