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CAZyme Information: SDRG_01468-t26_1-p1

You are here: Home > Sequence: SDRG_01468-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_01468-t26_1-p1
CAZy Family AA3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
446 JH767134|CGC1 48497.81 6.8083
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.2:130

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH14 25 431 1.1e-124 0.970873786407767

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178400 PLN02803 1.96e-128 21 445 86 512
beta-amylase
215099 PLN00197 2.35e-119 21 445 106 538
beta-amylase; Provisional
215431 PLN02801 3.38e-117 21 429 16 427
beta-amylase
366599 Glyco_hydro_14 7.82e-96 25 429 2 388
Glycosyl hydrolase family 14. This family are beta amylases.
178493 PLN02905 2.02e-91 21 428 265 673
beta-amylase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.08e-260 1 445 10 455
9.13e-255 20 446 20 446
4.11e-251 17 446 17 446
1.17e-228 17 412 17 412
1.24e-206 13 444 10 448

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.58e-91 21 402 12 384
Chain A, beta-amylase [Glycine max]
1.51e-90 21 402 12 384
Beta-AmylaseBETA-Cyclodextrin Complex [Glycine max],1Q6C_A Crystal Structure of Soybean Beta-Amylase Complexed with Maltose [Glycine max],1WDP_A The role of an inner loop in the catalytic mechanism of soybean beta-amylase [Glycine max]
2.12e-90 21 402 12 384
Chain A, Beta-amylase [Glycine max],1UKP_B Chain B, Beta-amylase [Glycine max],1UKP_C Chain C, Beta-amylase [Glycine max],1UKP_D Chain D, Beta-amylase [Glycine max]
2.12e-90 21 402 12 384
Chain A, Beta-amylase [Glycine max],1UKO_B Chain B, Beta-amylase [Glycine max],1UKO_C Chain C, Beta-amylase [Glycine max],1UKO_D Chain D, Beta-amylase [Glycine max]
4.22e-90 21 402 12 384
Chain A, beta-amylase [Glycine max],1Q6F_A Chain A, beta-amylase [Glycine max]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.84e-102 18 445 83 512
Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3
2.51e-101 21 446 93 523
Beta-amylase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BAMY2 PE=1 SV=1
1.28e-95 21 427 73 481
Beta-amylase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BAMY1 PE=1 SV=1
5.79e-94 21 445 106 540
Beta-amylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1
1.75e-88 21 402 13 385
Beta-amylase OS=Glycine max OX=3847 GN=BMY1 PE=1 SV=3

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000298 0.999662 CS pos: 19-20. Pr: 0.9716

TMHMM  Annotations      download full data without filtering help

Start End
7 29