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CAZyme Information: SDRG_00948-t26_1-p1

You are here: Home > Sequence: SDRG_00948-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_00948-t26_1-p1
CAZy Family AA17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
352 37420.73 7.4170
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SDRG_00948-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 14 246 1.1e-74 0.9102040816326531

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395595 CBM_1 1.81e-09 273 301 1 29
Fungal cellulose binding domain.
197593 fCBD 2.77e-08 272 305 1 34
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi
197593 fCBD 9.53e-08 315 347 1 33
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi
395595 CBM_1 4.25e-07 316 344 1 29
Fungal cellulose binding domain.
411100 internalin_K 1.11e-04 231 270 509 548
class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.43e-177 1 315 1 315
8.69e-162 1 315 1 309
1.71e-119 9 312 6 333
6.59e-90 10 309 6 304
8.22e-90 22 309 18 299

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.29e-16 58 191 31 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]
1.79e-09 274 304 5 35
Chain A, C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I [Trichoderma reesei],2CBH_A Chain A, C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I [Trichoderma reesei],2MWJ_A Chain A, Exoglucanase 1 [Trichoderma reesei],2MWK_A Chain A, Exoglucanase 1 [Trichoderma reesei],5X34_A Chain A, Exoglucanase 1 [Trichoderma reesei],5X35_A Chain A, Exoglucanase 1 [Trichoderma reesei],5X36_A Chain A, Exoglucanase 1 [Trichoderma reesei],5X37_A Chain A, Exoglucanase 1 [Trichoderma reesei],5X38_A Chain A, Exoglucanase 1 [Trichoderma reesei]
1.79e-09 274 304 5 35
Chain A, Exoglucanase 1 [Trichoderma reesei]
6.28e-09 274 304 5 35
Chain A, CELLOBIOHYDROLASE I [Trichoderma reesei]
1.61e-08 275 304 6 35
Chain A, CELLOBIOHYDROLASE I [Trichoderma reesei],1AZH_A Chain A, CELLOBIOHYDROLASE I [Trichoderma reesei],5X3C_A Chain A, Exoglucanase 1 [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.80e-08 273 313 23 63
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=cbhC PE=3 SV=1
1.80e-08 273 313 23 63
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=cbhC PE=3 SV=1
2.44e-08 265 304 307 346
Probable endo-beta-1,4-glucanase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=eglD PE=3 SV=1
2.44e-08 265 304 307 346
Probable endo-beta-1,4-glucanase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=eglD PE=3 SV=1
4.21e-08 273 313 23 63
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=cbhC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000187 0.999764 CS pos: 22-23. Pr: 0.9356

TMHMM  Annotations      help

There is no transmembrane helices in SDRG_00948-t26_1-p1.