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CAZyme Information: SDRG_00613-t26_1-p1

You are here: Home > Sequence: SDRG_00613-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia diclina
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia diclina
CAZyme ID SDRG_00613-t26_1-p1
CAZy Family AA17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
587 62220.95 6.8702
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SdiclinaVS20 17448 1156394 89 17359
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 18 549 6.3e-113 0.9726277372262774

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 2.79e-34 22 549 8 535
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 4.62e-18 22 295 6 278
choline dehydrogenase; Validated
366272 GMC_oxred_N 1.74e-09 108 294 24 207
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 5.49e-07 21 295 55 306
Protein HOTHEAD
224154 COG1233 2.44e-04 22 153 4 140
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.49e-181 18 566 20 566
5.74e-170 9 549 11 551
1.99e-167 6 561 8 561
2.34e-162 22 529 22 526
1.05e-122 19 544 26 545

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.51e-55 22 554 3 541
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
2.76e-55 22 554 8 546
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
1.71e-36 19 549 5 544
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
2.42e-36 19 550 227 766
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
3.25e-36 13 549 221 766
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.78e-53 22 554 235 773
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
4.44e-16 22 291 6 275
Oxygen-dependent choline dehydrogenase OS=Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815) OX=391038 GN=betA PE=3 SV=1
4.04e-15 22 560 3 542
Oxygen-dependent choline dehydrogenase OS=Klebsiella pneumoniae (strain 342) OX=507522 GN=betA PE=3 SV=1
7.11e-15 22 312 3 295
Oxygen-dependent choline dehydrogenase OS=Proteus mirabilis (strain HI4320) OX=529507 GN=betA PE=3 SV=1
9.14e-15 21 544 6 530
4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.002016 0.997953 CS pos: 20-21. Pr: 0.9603

TMHMM  Annotations      download full data without filtering help

Start End
7 29