logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SAPIO_CDS9828-t41_1-p1

You are here: Home > Sequence: SAPIO_CDS9828-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Scedosporium apiospermum
Lineage Ascomycota; Sordariomycetes; ; Microascaceae; Scedosporium; Scedosporium apiospermum
CAZyme ID SAPIO_CDS9828-t41_1-p1
CAZy Family GT4
CAZyme Description Endo-1,4-beta-xylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
223 JOWA01000154|CGC4 24003.34 7.3009
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SapiospermumIHEM14462 10920 N/A 2544 8376
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:61

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH11 41 217 1.8e-73 0.9887005649717514

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395367 Glyco_hydro_11 7.26e-98 41 215 1 174
Glycosyl hydrolases family 11.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.97e-123 16 222 16 221
2.97e-123 16 222 16 221
5.98e-123 11 222 11 221
9.36e-112 17 219 27 225
1.92e-103 1 219 1 217

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.04e-94 33 219 6 192
High resolution structure of GH11 xylanase from Nectria haematococca [Fusarium vanettenii 77-13-4]
4.46e-93 33 219 4 189
Crystal structure of family 11 xylanase in complex with inhibitor (XIP-I) [Talaromyces funiculosus]
1.86e-91 24 219 11 206
Xylanase 11C from Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) [Talaromyces funiculosus],3WP3_B Xylanase 11C from Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) [Talaromyces funiculosus]
2.52e-90 33 219 4 190
Chain A, Endo-1,4-beta-xylanase [Thermochaetoides thermophila],1H1A_B Chain B, Endo-1,4-beta-xylanase [Thermochaetoides thermophila]
2.99e-90 33 219 4 190
Chain A, endoxylanase 11A [Thermochaetoides thermophila],1XNK_B Chain B, endoxylanase 11A [Thermochaetoides thermophila]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.46e-97 31 219 44 231
Probable endo-1,4-beta-xylanase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=xlnA PE=3 SV=2
6.46e-97 31 219 44 231
Endo-1,4-beta-xylanase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xlnA PE=1 SV=1
1.03e-96 15 219 15 224
Endo-1,4-beta-xylanase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xlnA PE=1 SV=1
3.85e-96 26 222 35 232
Endo-1,4-beta-xylanase 1 OS=Magnaporthe grisea OX=148305 GN=XYL1 PE=1 SV=1
3.85e-96 26 222 35 232
Endo-1,4-beta-xylanase 1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=XYL1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000243 0.999732 CS pos: 31-32. Pr: 0.6041

TMHMM  Annotations      help

There is no transmembrane helices in SAPIO_CDS9828-t41_1-p1.