logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SAPIO_CDS9024-t41_1-p1

You are here: Home > Sequence: SAPIO_CDS9024-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Scedosporium apiospermum
Lineage Ascomycota; Sordariomycetes; ; Microascaceae; Scedosporium; Scedosporium apiospermum
CAZyme ID SAPIO_CDS9024-t41_1-p1
CAZy Family GT22
CAZyme Description Alcohol dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
661 JOWA01000132|CGC10 70501.48 6.5010
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SapiospermumIHEM14462 10920 N/A 2544 8376
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SAPIO_CDS9024-t41_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 36 658 1.8e-102 0.9929577464788732

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 4.04e-74 35 661 4 535
choline dehydrogenase; Validated
225186 BetA 1.41e-70 30 661 1 537
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 1.66e-32 520 653 5 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 1.56e-24 19 639 36 558
Protein HOTHEAD
366272 GMC_oxred_N 7.68e-15 137 411 19 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 16 660 19 662
5.75e-286 37 658 30 655
1.14e-285 37 658 49 674
1.14e-285 37 658 49 674
1.14e-285 37 658 49 674

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.09e-39 31 661 2 564
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
5.67e-39 35 661 6 564
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
8.87e-39 35 661 82 640
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
1.04e-38 35 661 6 564
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
1.04e-38 35 661 6 564
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.68e-45 37 658 36 608
Oxidoreductase cicC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cicC PE=1 SV=1
2.43e-44 36 659 4 532
Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1
6.38e-44 38 659 4 527
Oxygen-dependent choline dehydrogenase OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=betA PE=3 SV=1
7.52e-44 37 659 7 537
Oxygen-dependent choline dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) OX=391008 GN=betA PE=3 SV=1
1.14e-43 35 659 3 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.002002 0.997959 CS pos: 18-19. Pr: 0.9653

TMHMM  Annotations      help

There is no transmembrane helices in SAPIO_CDS9024-t41_1-p1.