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CAZyme Information: SAPIO_CDS8557-t41_1-p1

You are here: Home > Sequence: SAPIO_CDS8557-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Scedosporium apiospermum
Lineage Ascomycota; Sordariomycetes; ; Microascaceae; Scedosporium; Scedosporium apiospermum
CAZyme ID SAPIO_CDS8557-t41_1-p1
CAZy Family GT1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
761 JOWA01000121|CGC12 82855.68 3.9871
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SapiospermumIHEM14462 10920 N/A 2544 8376
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:13

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 175 719 1.6e-236 0.9781021897810219

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 2.26e-61 180 718 7 535
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 3.03e-33 182 717 7 532
choline dehydrogenase; Validated
398739 GMC_oxred_C 5.11e-23 577 712 3 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 4.34e-19 261 483 23 217
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 1.44e-14 176 462 51 318
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.30e-250 181 719 277 813
6.35e-246 180 719 248 786
1.74e-245 165 719 234 785
4.66e-244 165 719 224 783
5.19e-242 167 719 236 785

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.97e-232 174 720 1 546
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
9.40e-230 173 720 222 768
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
3.33e-227 174 721 223 768
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
1.16e-127 181 722 3 540
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
1.35e-127 181 722 8 545
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.47e-124 181 722 235 772
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
3.31e-28 181 717 5 531
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1
5.91e-28 181 717 5 531
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1
2.40e-26 176 725 41 585
Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1
3.47e-25 180 717 4 531
Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001623 0.998327 CS pos: 23-24. Pr: 0.9626

TMHMM  Annotations      help

There is no transmembrane helices in SAPIO_CDS8557-t41_1-p1.