logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SAPIO_CDS7623-t41_1-p1

You are here: Home > Sequence: SAPIO_CDS7623-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Scedosporium apiospermum
Lineage Ascomycota; Sordariomycetes; ; Microascaceae; Scedosporium; Scedosporium apiospermum
CAZyme ID SAPIO_CDS7623-t41_1-p1
CAZy Family GH7
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1433 153005.40 4.2980
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SapiospermumIHEM14462 10920 N/A 2544 8376
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SAPIO_CDS7623-t41_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH55 105 875 4.5e-241 0.9918918918918919

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
403800 Pectate_lyase_3 4.58e-72 136 378 1 213
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 45 1429 1 1522
0.0 7 1268 7 1409
0.0 45 1165 1 1311
0.0 36 1068 33 1045
0.0 45 1165 1 1307

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.90e-171 112 875 4 752
Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
1.28e-166 114 875 26 755
Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.11e-169 112 875 41 873
Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
2.39e-136 94 856 28 767
Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
8.86e-42 121 880 48 755
Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000263 0.999694 CS pos: 19-20. Pr: 0.9339

TMHMM  Annotations      help

There is no transmembrane helices in SAPIO_CDS7623-t41_1-p1.