CAZyme Information: SAPIO_CDS6754-t41_1-p1

Basic Information

• Species: Scedosporium apiospermum
• Lineage: Ascomycota; Sordariomycetes; ; Microascaceae; Scedosporium; Scedosporium apiospermum
• CAZyme ID: SAPIO_CDS6754-t41_1-p1
• CAZy Family: GH47
• CAZyme Description: Alcohol dehydrogenase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
630	JOWA01000107|CGC4	67224.37	6.6998

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_SapiospermumIHEM14462	10920	N/A	2544	8376

• Gene Location: location=JOWA01000107:184091-186142(+)

Full Sequence      

MYPQLVSLLLFLSSFYSASAASVSKAPHATRQTDNNPSVYDYVVVGSGPGGGPLAARLAI
AGKKVLLVEAGDDQGESIPYQVPALNLQSTEYEPMRWDYYVNHFSDLSVQKKDSKMTYRK
DNGDLYVGLDPPSGATPLGVLYPRAGTLGGSSNMRKYFVRLEKASYLPNGIIGHGFNGWL
TTTVTDLGLIIKDIKLLTVILSAASSMGKNLLGAILSTVAGLGQVLLRDLNVDTNGRDSA
EGLYQVPISVANGVRVGPRDIILSTANAVNPDGSRKYHLDIKLNTLVTKIRFDNSGAKPR
AVGVDFLVGQSLYKADPRFQGSSVGQPGSVNVSAEVIVSAGSFNTPQLLKLSGVGPVEEL
SALGIPIVVDLPGVGTNLQDRYETSVIGKTPTDFQITEDCTFFRSADDPCLKSWQSGANG
RGIYASNGVSLGVVKKSSVAEGDPDIFIAGAPVGFPGYYPGYSVDGTVDARHWTWIVLKA
HTRNRAGNITLRSTDPRDMPQIDFNSFSDEADAAKDVKALVEGMELSRKMLNNVLPLTGG
FDEVWPGSKVSGAGLSQFVKNEAWGHHASCTCPIGKDGDPMAVLDSKFRVRGTDGLRVVD
ASVFPKIPGFYIAVPVYMISEKAADVILGF

Enzyme Prediction     

No EC number prediction in SAPIO_CDS6754-t41_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	230	628	2.5e-69	0.6795774647887324

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
235000	PRK02106	2.25e-64	250	629	194	533	choline dehydrogenase; Validated
225186	BetA	1.33e-43	54	629	22	535	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739	GMC_oxred_C	2.06e-32	487	623	5	143	GMC oxidoreductase. This domain found associated with pfam00732.
215420	PLN02785	9.97e-19	279	609	235	558	Protein HOTHEAD
366272	GMC_oxred_N	6.22e-10	253	383	120	218	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UQC85673.1|AA3	0.0	12	629	11	661
QRD81945.1|AA3	5.83e-273	9	628	1	655
QMW39616.1|AA3	9.32e-272	9	628	1	674
QMW27545.1|AA3	9.32e-272	9	628	1	674
UDD55433.1|AA3	9.32e-272	9	628	1	674

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6YS2_AAA	4.46e-33	40	629	8	562	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
6YS1_AAA	1.97e-32	40	629	8	562	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
6YRU_AAA	1.97e-32	40	629	8	562	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6ZH7_A	1.97e-32	40	629	8	562	Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
5NCC_A	2.23e-32	40	629	24	578	Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q48CM7|BETA_PSE14	3.02e-39	38	629	5	537	Oxygen-dependent choline dehydrogenase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=betA PE=3 SV=1
sp|Q4ZM63|BETA_PSEU2	4.11e-39	38	629	5	537	Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=betA PE=3 SV=1
sp|Q88AE7|BETA_PSESM	7.60e-39	38	629	5	537	Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=betA PE=3 SV=1
sp|Q6LGH5|BETA_PHOPR	6.50e-38	38	629	3	532	Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1
sp|Q6UPE0|CHDH_RAT	1.03e-36	264	629	244	578	Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.011744	0.988231	CS pos: 20-21. Pr: 0.9525

TMHMM  Annotations     

There is no transmembrane helices in SAPIO_CDS6754-t41_1-p1.