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CAZyme Information: SAPIO_CDS4381-t41_1-p1

You are here: Home > Sequence: SAPIO_CDS4381-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Scedosporium apiospermum
Lineage Ascomycota; Sordariomycetes; ; Microascaceae; Scedosporium; Scedosporium apiospermum
CAZyme ID SAPIO_CDS4381-t41_1-p1
CAZy Family GH15|GH15|CBM20
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
335 35388.38 6.2681
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SapiospermumIHEM14462 10920 N/A 2544 8376
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SAPIO_CDS4381-t41_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 90 270 5.6e-99 0.989010989010989

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 1.53e-63 86 272 1 190
Amb_all domain.
226384 PelB 2.64e-57 69 334 59 344
Pectate lyase [Carbohydrate transport and metabolism].
366158 Pec_lyase_C 8.78e-44 97 268 30 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.60e-135 43 335 148 440
1.43e-130 43 334 35 326
7.43e-130 48 334 28 313
1.65e-129 43 334 35 326
1.65e-129 43 334 35 326

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.81e-41 53 334 6 325
Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
1.18e-36 97 332 76 353
Chain A, PECTATE LYASE E [Dickeya chrysanthemi]
6.46e-32 96 245 127 301
Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
9.36e-31 96 251 122 301
Structural insights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168]
1.26e-30 96 251 143 322
Bacillus Subtilis Pectate Lyase [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.47e-64 37 313 24 301
Pectate lyase A OS=Aspergillus niger OX=5061 GN=plyA PE=1 SV=1
3.29e-64 68 330 64 316
Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1
3.29e-64 68 330 64 316
Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1
3.49e-64 37 313 24 301
Probable pectate lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=plyA PE=3 SV=1
2.12e-63 22 288 5 278
Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000276 0.999686 CS pos: 21-22. Pr: 0.9658

TMHMM  Annotations      download full data without filtering help

Start End
7 29