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CAZyme Information: RhiirA1_447113-t46_1-p1
You are here: Home > Sequence: RhiirA1_447113-t46_1-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Rhizophagus irregularis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Mucoromycota; Glomeromycetes; ; Glomeraceae; Rhizophagus; Rhizophagus irregularis | |||||||||||
| CAZyme ID | RhiirA1_447113-t46_1-p1 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 1.1.3.16:1 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 4 | 198 | 2.9e-34 | 0.3890845070422535 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 235000 | PRK02106 | 8.51e-29 | 12 | 227 | 230 | 531 | choline dehydrogenase; Validated |
| 225186 | BetA | 3.47e-27 | 16 | 197 | 236 | 422 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 274888 | Rv0697 | 1.06e-13 | 14 | 186 | 226 | 371 | dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. |
| 215420 | PLN02785 | 1.21e-12 | 16 | 197 | 257 | 454 | Protein HOTHEAD |
| 366272 | GMC_oxred_N | 7.26e-12 | 16 | 83 | 162 | 217 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.64e-23 | 16 | 197 | 298 | 511 | |
| 1.64e-23 | 16 | 197 | 298 | 511 | |
| 1.10e-18 | 12 | 197 | 338 | 554 | |
| 1.35e-18 | 16 | 197 | 43 | 249 | |
| 1.87e-18 | 16 | 197 | 43 | 249 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.68e-13 | 26 | 197 | 250 | 403 | Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the oxidized state [Methylovorus sp. MP688],4UDP_B Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the oxidized state [Methylovorus sp. MP688],4UDQ_A Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the reduced state [Methylovorus sp. MP688],4UDQ_B Crystal structure of 5-hydroxymethylfurfural oxidase (HMFO) in the reduced state [Methylovorus sp. MP688] |
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| 1.68e-13 | 26 | 197 | 250 | 403 | Crystal structure of the H467A mutant of 5-hydroxymethylfurfural oxidase (HMFO) [Methylovorus sp. MP688],4UDR_B Crystal structure of the H467A mutant of 5-hydroxymethylfurfural oxidase (HMFO) [Methylovorus sp. MP688] |
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| 1.68e-13 | 26 | 197 | 250 | 403 | Crystal structure of the V465T mutant of 5-(Hydroxymethyl)furfural Oxidase (HMFO) [Methylovorus sp. MP688],6F97_B Crystal structure of the V465T mutant of 5-(Hydroxymethyl)furfural Oxidase (HMFO) [Methylovorus sp. MP688] |
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| 5.10e-11 | 16 | 230 | 241 | 438 | Chain A, (R)-mandelonitrile lyase [Prunus dulcis] |
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| 7.04e-11 | 16 | 186 | 236 | 435 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.17e-15 | 16 | 197 | 277 | 464 | Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1 |
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| 1.17e-15 | 16 | 197 | 274 | 461 | Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1 |
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| 2.04e-15 | 1 | 197 | 218 | 417 | L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans OX=442 PE=3 SV=1 |
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| 1.34e-14 | 2 | 189 | 275 | 478 | Glucose dehydrogenase [FAD, quinone] OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=Gld PE=3 SV=4 |
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| 6.06e-14 | 32 | 197 | 310 | 486 | Glucose dehydrogenase [FAD, quinone] OS=Drosophila melanogaster OX=7227 GN=Gld PE=3 SV=3 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000068 | 0.000000 |