CAZyme Information: RhiirA1_417339-t46_1-p1

Basic Information

• Species: Rhizophagus irregularis
• Lineage: Mucoromycota; Glomeromycetes; ; Glomeraceae; Rhizophagus; Rhizophagus irregularis
• CAZyme ID: RhiirA1_417339-t46_1-p1
• CAZy Family: GH47
• CAZyme Description: glycoside hydrolase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
908		103318.19	6.0763

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_RirregularisA1DAOM664342	26582	N/A	106	26476

• Gene Location: location=LLXH01000356:9390-12750(-)

Full Sequence      

MPPPAVENINVVQTTVNTPEIFVDPEVASIYSDGDSSDERSLISKASDEFRPSHNLTTPD
LKRSASVSSFSSYASSPDIPLPESNDHDSTLQNMLALGESGALAQNWFSSGTLKADGRWF
KDDKGRTCLLRGVNLCGSSKLPTKPDGSSHLSEGFFDHRNVSFVGRPFPLEEVQQHFARL
RAWGLTFVRLLVTWESLEHAGPGIYDEEYIDYLINVIEQMSRYGIKCFIDPHQDCWSRFS
GGSGAPGWTFEVAGLDITKFKTTGAAYVHNTNHKPGDSLPMVWPTNYTKLASSTMFTLFW
GGDVFAPNTTYEGVNVKEFLQEKYVNCYKHLARRLQHLDAVIGFELMNEPHQGYIGLADL
HRYDGGKTLVFGDSPSALQSFALGDGIPQEVEVWIKSWPFPTRKDKTRVINEESESAWLT
GKCIWRQHGVWDVDAKTNKPKVLNKDYFLKNPKTGEKLDYYKDFYLPFVKRYAEGIQSVS
KEYFVFVEPLPNEPPPIWTPNDHHNNIIYAPHWYDLKALFTKTFNGKITHDVQRLTKGAH
HIAAATYFGISGAKKNYSGQVRNIVKGGLQFVGEKPCIIGECGIPMDINEKQAFLTNDWV
HHSNFLDAVLGAMEKNLVNFTLWNYNPTNDNTHGDHWYGEDFSIYSRSINEEITITKTKE
IKTDETEESINGTITKKIQKLKIQTDTLSIISSNKNTYINEENEKSESEISDKVNSPNSP
TSPFDLTRVHFLEQDDETDSEQFHHQGGRVLEAVLRPYAAKMPGIPQIMNFNLKNLEFIF
KFTNYPLSQQSNINSIVAPEAEIYIPNYHYKKLLLDIRVSDGDWRYVRNRQTLYWRVKDW
TTEGVVHTLRIRVVENSEGEEISKRGELLSSDSLNKKLDIDAKPEVDIYAKWIVSAVAMI
MFAYWWQV

Enzyme Prediction     

EC	3.2.1.45:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH5	122	630	1.1e-201	0.9962894248608535

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
408348	Glyco_hydro_5_C	4.39e-20	756	851	1	86	Glycoside hydrolase family 5 C-terminal domain. This is the C-terminal domain of endo-glycoceramidase II (EGC), a membrane-associated family 5 glycosidase pfam00150. The C-terminal domain assumes a beta-sandwich fold, which resembles that of many carbohydrate-binding modules.
395098	Cellulase	1.33e-04	174	234	27	88	Cellulase (glycosyl hydrolase family 5).
225344	BglC	0.003	173	351	75	192	Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CDS13578.1|GH5_12	1.75e-280	104	852	18	708
EIE79467.1|GH5_12|3.2.1.45	6.73e-267	113	857	15	677
ULM60693.1|GH5_12	2.23e-184	113	853	72	815
QGI82100.1|GH5_12	8.66e-179	111	866	16	740
QGI64843.1|GH5_12	8.66e-179	111	866	16	740

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7LPO_A	3.98e-100	120	852	28	769	Chain A, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99],7LPO_B Chain B, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99],7LPO_C Chain C, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99],7LPO_D Chain D, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99],7LPP_A Chain A, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99],7LPP_B Chain B, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99],7LPP_C Chain C, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99],7LPP_D Chain D, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99],7LPQ_A Chain A, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99],7LPQ_B Chain B, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99],7LPQ_C Chain C, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99],7LPQ_D Chain D, Cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
2OSW_A	3.33e-17	100	353	12	228	Endo-glycoceramidase II from Rhodococcus sp. [Rhodococcus sp.],2OSW_B Endo-glycoceramidase II from Rhodococcus sp. [Rhodococcus sp.],2OYK_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYK_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex [Rhodococcus sp.],2OYL_A Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYL_B Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex [Rhodococcus sp.],2OYM_A Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.],2OYM_B Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex [Rhodococcus sp.]
2OSX_A	3.33e-17	100	353	12	228	Chain A, Endoglycoceramidase II [Rhodococcus sp.]
2OSY_A	1.82e-16	100	353	12	228	Chain A, Endoglycoceramidase II [Rhodococcus sp.],2OSY_B Chain B, Endoglycoceramidase II [Rhodococcus sp.]
6JYZ_A	1.08e-08	121	353	33	226	Chain A, Putative secreted endoglycosylceramidase [Rhodococcus hoagii 103S]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|I1BTD7|EGCR1_RHIO9	1.20e-267	113	857	15	677	Glucosylceramidase OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=ERC1 PE=1 SV=1
sp|H1AE12|EGCR1_CRYNH	8.04e-152	110	648	13	559	Glucosylceramidase OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=EGC1 PE=1 SV=1
sp|H1AE13|EGCR1_ASPFM	5.39e-133	113	860	6	737	Glucosylceramidase OS=Neosartorya fumigata OX=746128 GN=egc1 PE=1 SV=1
sp|P40566|EGH1_YEAST	1.91e-111	113	835	7	727	Ergosteryl-beta-glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=EGH1 PE=1 SV=1
sp|A0A3S5YBC7|EGCSE_RHOH1	5.26e-07	112	353	35	218	Endoglycoceramidase I OS=Rhodococcus hoagii (strain 103S) OX=685727 GN=REQ_38260 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999132	0.000880

TMHMM  Annotations     

There is no transmembrane helices in RhiirA1_417339-t46_1-p1.