You are browsing environment: FUNGIDB
CAZyme Information: RVD87892.1
You are here: Home > Sequence: RVD87892.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Arthrobotrys flagrans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Orbiliomycetes; ; Orbiliaceae; Arthrobotrys; Arthrobotrys flagrans | |||||||||||
| CAZyme ID | RVD87892.1 | |||||||||||
| CAZy Family | GH76 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.67:7 | 3.2.1.-:2 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 88 | 439 | 1.1e-75 | 0.9292307692307692 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 4.47e-47 | 105 | 436 | 17 | 314 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 4.06e-29 | 59 | 434 | 48 | 406 | Probable polygalacturonase |
| 177865 | PLN02218 | 4.92e-29 | 68 | 436 | 75 | 417 | polygalacturonase ADPG |
| 215540 | PLN03010 | 2.00e-26 | 67 | 438 | 53 | 390 | polygalacturonase |
| 215120 | PLN02188 | 1.42e-23 | 68 | 436 | 44 | 389 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 447 | 1 | 447 | |
| 3.15e-184 | 39 | 446 | 34 | 431 | |
| 3.15e-184 | 39 | 446 | 34 | 431 | |
| 1.47e-183 | 28 | 446 | 24 | 438 | |
| 3.39e-183 | 46 | 447 | 33 | 432 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.26e-65 | 61 | 436 | 16 | 373 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
|
| 2.98e-26 | 105 | 394 | 34 | 306 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
|
| 8.63e-25 | 75 | 408 | 15 | 318 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 8.63e-25 | 75 | 408 | 15 | 318 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
|
| 1.04e-24 | 75 | 408 | 7 | 310 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.59e-185 | 39 | 446 | 34 | 431 | Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaX-1 PE=1 SV=1 |
|
| 7.39e-185 | 46 | 447 | 33 | 432 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaX PE=3 SV=2 |
|
| 7.39e-185 | 46 | 447 | 33 | 432 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2 |
|
| 6.02e-184 | 46 | 447 | 33 | 432 | Probable exopolygalacturonase X OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaX PE=3 SV=2 |
|
| 1.84e-183 | 46 | 447 | 33 | 432 | Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaX PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000305 | 0.999656 | CS pos: 20-21. Pr: 0.9770 |