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CAZyme Information: RVD84769.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Arthrobotrys flagrans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Orbiliomycetes; ; Orbiliaceae; Arthrobotrys; Arthrobotrys flagrans | |||||||||||
| CAZyme ID | RVD84769.1 | |||||||||||
| CAZy Family | GH16 | |||||||||||
| CAZyme Description | CBM1 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A437A0Y6] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE12 | 82 | 263 | 7.4e-38 | 0.9761904761904762 |
| CBM1 | 7 | 34 | 8.4e-16 | 0.9310344827586207 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 238859 | Rhamnogalacturan_acetylesterase_like | 5.86e-53 | 81 | 265 | 3 | 198 | Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria. |
| 395595 | CBM_1 | 3.83e-15 | 7 | 34 | 2 | 29 | Fungal cellulose binding domain. |
| 197593 | fCBD | 5.22e-15 | 5 | 38 | 1 | 34 | Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi |
| 238141 | SGNH_hydrolase | 1.50e-06 | 82 | 264 | 1 | 187 | SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. |
| 225353 | TesA | 1.10e-05 | 76 | 261 | 5 | 204 | Lysophospholipase L1 or related esterase [Amino acid transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.27e-170 | 1 | 293 | 11 | 301 | |
| 2.65e-44 | 81 | 288 | 38 | 250 | |
| 5.71e-43 | 81 | 266 | 30 | 217 | |
| 5.71e-43 | 81 | 266 | 30 | 217 | |
| 5.71e-43 | 81 | 266 | 30 | 217 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.32e-10 | 3 | 41 | 22 | 70 | Crystal structure of Endo-1,4-beta-xylanase-like protein from Acremonium chrysogenum [Acremonium chrysogenum ATCC 11550],5MRJ_B Crystal structure of Endo-1,4-beta-xylanase-like protein from Acremonium chrysogenum [Acremonium chrysogenum ATCC 11550] |
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| 1.44e-09 | 7 | 38 | 7 | 38 | Chain A, ENDOGLUCANASE EG-1 [Trichoderma reesei] |
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| 3.82e-09 | 3 | 40 | 4 | 41 | Crystal Structure of Glucuronoyl Esterase from Cerrena unicolor covalent complex with the aldouronic acid UXXR [Cerrena unicolor],6RV8_B Crystal Structure of Glucuronoyl Esterase from Cerrena unicolor covalent complex with the aldouronic acid UXXR [Cerrena unicolor] |
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| 1.09e-08 | 4 | 38 | 372 | 406 | GH10 endo-xylanase [Aspergillus aculeatus ATCC 16872],6Q8M_B GH10 endo-xylanase [Aspergillus aculeatus ATCC 16872],6Q8N_A GH10 endo-xylanase in complex with xylobiose epoxide inhibitor [Aspergillus aculeatus ATCC 16872],6Q8N_B GH10 endo-xylanase in complex with xylobiose epoxide inhibitor [Aspergillus aculeatus ATCC 16872] |
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| 2.40e-08 | 5 | 38 | 552 | 585 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.97e-15 | 3 | 50 | 21 | 68 | Exoglucanase 3 OS=Agaricus bisporus OX=5341 GN=cel3 PE=1 SV=1 |
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| 2.25e-13 | 3 | 40 | 21 | 58 | Endo-1,4-beta-xylanase C OS=Phanerodontia chrysosporium OX=2822231 GN=xynC PE=1 SV=1 |
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| 2.65e-13 | 3 | 42 | 18 | 57 | 4-O-methyl-glucuronoyl methylesterase OS=Hypocrea jecorina (strain QM6a) OX=431241 GN=cip2 PE=1 SV=1 |
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| 4.94e-13 | 4 | 45 | 27 | 68 | Exoglucanase-6A OS=Humicola insolens OX=34413 GN=cel6A PE=1 SV=1 |
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| 6.10e-13 | 3 | 48 | 18 | 63 | Probable mannan endo-1,4-beta-mannosidase F OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=manF PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000026 | 0.000031 |