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CAZyme Information: RVD83219.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Arthrobotrys flagrans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Orbiliomycetes; ; Orbiliaceae; Arthrobotrys; Arthrobotrys flagrans | |||||||||||
| CAZyme ID | RVD83219.1 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:14 | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 120 | 455 | 1.6e-60 | 0.9353846153846154 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.90e-92 | 139 | 466 | 1 | 319 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 1.91e-25 | 190 | 459 | 156 | 415 | polygalacturonase ADPG |
| 215426 | PLN02793 | 8.39e-22 | 284 | 459 | 226 | 406 | Probable polygalacturonase |
| 227721 | Pgu1 | 5.34e-21 | 189 | 414 | 189 | 427 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215120 | PLN02188 | 4.37e-16 | 284 | 458 | 204 | 384 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.82e-301 | 1 | 469 | 1 | 474 | |
| 3.63e-130 | 121 | 467 | 419 | 766 | |
| 7.37e-127 | 121 | 467 | 28 | 377 | |
| 1.43e-126 | 124 | 467 | 448 | 792 | |
| 4.69e-126 | 124 | 467 | 25 | 369 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.67e-112 | 123 | 467 | 2 | 348 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
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| 5.88e-74 | 122 | 465 | 9 | 341 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 5.88e-74 | 122 | 465 | 9 | 341 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.57e-73 | 122 | 465 | 1 | 333 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 5.10e-73 | 124 | 465 | 3 | 333 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.42e-111 | 123 | 467 | 26 | 372 | Polygalacturonase OS=Gibberella fujikuroi OX=5127 GN=PGA PE=1 SV=1 |
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| 3.66e-109 | 124 | 467 | 173 | 514 | Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaD PE=3 SV=1 |
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| 1.46e-103 | 124 | 466 | 129 | 469 | Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1 |
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| 2.55e-101 | 124 | 467 | 154 | 495 | Probable endopolygalacturonase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaD PE=3 SV=1 |
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| 2.55e-101 | 124 | 467 | 154 | 495 | Endopolygalacturonase D OS=Aspergillus niger OX=5061 GN=pgaD PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000246 | 0.999730 | CS pos: 29-30. Pr: 0.4893 |